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Wine grape
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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plasma membrane 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:nucleus
EpiLoc:cytosol
MultiLoc:plasma membrane
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr1P22030_001 Banana cytosol 55.94 48.78
VIT_06s0004g02990.t01 Wine grape cytosol 61.89 44.14
GSMUA_AchrUn_... Banana extracellular, plasma membrane 22.73 43.05
Protein Annotations
Gene3D:1.10.510.10EntrezGene:100251930wikigene:100251930MapMan:18.4.5.9MapMan:27.3.2ProteinID:CBI16471
ProteinID:CBI16471.3UniProt:D7SLE3EMBL:FN594951GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0006464GO:GO:0006468GO:GO:0007154GO:GO:0007165GO:GO:0008150
GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016740GO:GO:0018105GO:GO:0018107
GO:GO:0019538GO:GO:0035556InterPro:IPR000719InterPro:Kinase-like_dom_sfEntrezGene:LOC100251930wikigene:LOC100251930
PFAM:PF00069PIRSF:PIRSF000654ScanProsite:PS00108PFscan:PS50011PANTHER:PTHR44241PANTHER:PTHR44241:SF2
InterPro:Prot_kinase_domSMART:SM00220SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASUniParc:UPI000198374BArrayExpress:VIT_06s0004g01140
EnsemblPlantsGene:VIT_06s0004g01140EnsemblPlants:VIT_06s0004g01140.t01unigene:Vvi.2042RefSeq:XP_002283332RefSeq:XP_002283332.2:
Description
No Description!
Coordinates
chr6:-:1235354..1243082
Molecular Weight (calculated)
32502.4 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.173
Length
286 amino acids
Sequence
(BLAST)
001: MINEYVKERK ISCRKYGKVV LYRNSNNGML FAIKIFYKCS LRKVHITPSE TAMSNVLREV SIMKMLEHPN IVNLVEVIDD PKSDYLYMVL EYVEGNGTCN
101: ISETQGVDET TARRYFKDIL AGIIYLHNHN VVHGDIKPEN LLLTKNGRVK IGDFGVSYVF EDDNDEFWRC LGTPAFTAPE CCSDIVYHGK AADTWAMGIT
201: LYYMVVGCYP FIGDGILDTY DKIVNTPLSF PKELDPELKD LLQGLLCKDP MQRTTLTAVA ENPWVMREGG TVPQRLCGCK LRNIQP
Best Arabidopsis Sequence Match ( AT3G45240.1 )
(BLAST)
001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQVFKDDDDQ LRRSPGTPVF TAPECCLGIT YSGRSADTWA
301: VGVTLYCMIL GQYPFLGDTL QDTYDKIVHN PLIIPEGLNP RLRDLIEGLL CKDPNQRMTL KAVAEHPWIT GEDGAISEYC CWCKRKAEEE EDQNHS
Arabidopsis Description
GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.