Factsheet for GSMUA_AchrUn_randomP08130_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
nucleus 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0004g01140.t01	Wine grape	cytosol	43.05	22.73
GSMUA_Achr1P22030_001	Banana	cytosol	48.34	22.26
GSMUA_Achr1P05590_001	Banana	mitochondrion	41.72	16.24

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	EnsemblPlantsGene:GSMUA_AchrUn_randomG08130_001	EnsemblPlants:GSMUA_AchrUn_randomP08130_001	EnsemblPlants:GSMUA_AchrUn_randomT08130_001	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
UniProt:M0U7C4	PFAM:PF00069	PFscan:PS50011	PANTHER:PTHR44241	PANTHER:PTHR44241:SF2	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	TMHMM:TMhelix	UniParc:UPI000296F9EE	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08130_001]

Coordinates

chrchrUn_random:+:34758758..34759697

Molecular Weight (calculated)

16820.3 Da

IEP (calculated)

4.501

GRAVY (calculated)

0.055

Length

151 amino acids

Sequence
(BLAST)

001: MKSLVIIYIC SSTLYTFPFG CLCQILSLQV SPVFTAPECC LGSSYHGRVA DIWAVGVTLY CMILGCCPFV GDSLKDTYDK IVHNPLNLPK ELDSELKDLQ
101: QGLLCKEDDI MWTNPWVIRD CGPIPWTSCR CNSGSFQKEN EMGSKSDTTD T

Best Arabidopsis Sequence Match ( AT3G45240.3 )
(BLAST)

001: MFCDSFAFAQ VMSCFGCFGG SERSRHSPNP YDDDTYSHDS GETSNPGGDD EEGEEEEEVE ELSRSKRSEE ILKCKLQNGL VCRQFPVKET NKLTRGEDED
101: GNKTINEFVR ERKIGSGSYG KVVLYRSTVD DKHYAIKAFH KSHLSRLRVA PSETAMGDVL REVMIMKTLE HPNIVNLIEV IDDPEFDDFY MVLEYVDGKW
201: AYDDSGPPGA LGEITARKYL RDVVAGLMYL HAHNVIHGDI KPDNLLVTST GRVKIGDFSV SQDDDDQLRR SPGTPVFTAP ECCLGITYSG RSADTWAVGV
301: TLYCMILGQY PFLGDTLQDT YDKIVHNPLI IPEGLNPRLR DLIEGLLCKD PNQRMTLKAV AEHPWITGED GAISEYCCWC KRKAEEEEDQ NHS

Arabidopsis Description

GRIK1Serine/threonine-protein kinase GRIK1 [Source:UniProtKB/Swiss-Prot;Acc:Q93V58]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.