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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 1
  • mitochondrion 2
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr6P06410_001 Banana nucleus 65.77 66.22
VIT_17s0000g01360.t01 Wine grape cytosol, mitochondrion, nucleus 55.7 49.11
KRH57236 Soybean cytosol 50.34 49.02
KRH03966 Soybean cytosol 50.34 48.7
Zm00001d016564_P001 Maize cytosol 53.02 46.75
CDY70544 Canola nucleus 48.32 45.86
AT3G48550.1 Thale cress nucleus 47.65 44.94
Bra018049.1-P Field mustard nucleus 48.32 44.72
Os04t0386300-01 Rice cytosol, mitochondrion, plastid 40.27 44.44
CDY60454 Canola nucleus 48.32 43.9
Bra029904.1-P Field mustard nucleus 48.32 43.9
PGSC0003DMT400046599 Potato nucleus 49.66 43.79
Solyc03g112920.1.1 Tomato nucleus 51.01 43.18
TraesCS2A01G282700.1 Wheat cytosol 51.68 42.78
CDX68463 Canola cytosol, mitochondrion, nucleus 46.98 42.68
TraesCS2B01G300000.1 Wheat cytosol 50.34 41.67
EES05120 Sorghum cytosol 48.99 40.78
TraesCS2D01G281400.1 Wheat cytosol 48.32 39.56
Zm00001d003978_P001 Maize cytosol 46.98 37.43
EES12026 Sorghum cytosol, plastid, vacuole 48.99 36.87
Protein Annotations
EnsemblPlants:GSMUA_Achr6P20920_001EnsemblPlants:GSMUA_Achr6T20920_001EnsemblPlantsGene:GSMUA_Achr6G20920_001GO:GO:0008150GO:GO:0009605GO:GO:0009606
GO:GO:0009628GO:GO:0009630ncoils:CoilPANTHER:PTHR34946SEG:segUniParc:UPI000296861B
UniProt:M0T8U0MapMan:35.2::::
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G20920_001]
Coordinates
chr6:-:16168827..16169276
Molecular Weight (calculated)
17096.1 Da
IEP (calculated)
6.128
GRAVY (calculated)
-0.750
Length
149 amino acids
Sequence
(BLAST)
001: MEEDDQRELR LLLSSSTRPP SHAPKSSAGT DTSDHPLLDL NLSMSISTLQ PSATEESHGY ARSLQLLKQQ TAEQIRLAAV ENAYAEQIRE LTRRELELAE
101: QEFARAQLVW ERAREEVKKA ERMKEIATRR INSACLEITC YSCHQRFRP
Best Arabidopsis Sequence Match ( AT3G48550.1 )
(BLAST)
001: MAEQQDHHKE LQLLPSPPST ESPVRKHRPT VITTDHHNNH HRSSSMIHHD LDLKLSISLS SISTAEELPN GGVEALKWQA AEQIRLAAIE KAYAERVREL
101: TRREMEMAQS EFARARVMWQ KAREEVERAE RLKERSMTKI DTACLEITCH SCRQRFRP
Arabidopsis Description
At3g48550 [Source:UniProtKB/TrEMBL;Acc:Q9SMP3]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.