Factsheet for GSMUA_Achr4P13800_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P06840_001	Banana	nucleus	62.13	66.54
GSMUA_Achr9P19330_001	Banana	mitochondrion	44.49	48.79
GSMUA_Achr1P23090_001	Banana	nucleus	41.18	38.49
KRH39204	Soybean	nucleus	16.91	27.22
VIT_01s0011g03470.t01	Wine grape	nucleus	29.41	25.0
KRH41626	Soybean	nucleus	15.07	24.85
KRH48474	Soybean	nucleus	28.31	24.6
GSMUA_Achr4P16600_001	Banana	nucleus	22.06	24.29
CDX84990	Canola	nucleus	21.69	23.79
Bra004033.1-P	Field mustard	nucleus	27.57	23.66
CDY04234	Canola	nucleus	27.57	23.66
CDY07380	Canola	nucleus	27.21	23.49
AT1G68550.2	Thale cress	nucleus	27.57	23.15
KRH35957	Soybean	nucleus	30.15	23.1
GSMUA_Achr7P21980_001	Banana	nucleus	20.96	23.08
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	22.43	22.59
KRG90812	Soybean	nucleus	30.51	22.55
Bra033923.1-P	Field mustard	nucleus	26.1	22.47
CDY44887	Canola	nucleus	26.1	22.47
CDX96010	Canola	nucleus	25.0	22.37
CDY65135	Canola	nucleus	25.74	22.36
Bra004318.1-P	Field mustard	nucleus	24.63	22.04
EER98690	Sorghum	nucleus	22.79	21.99
GSMUA_Achr2P19950_001	Banana	nucleus	22.06	21.98
GSMUA_Achr10P...	Banana	nucleus	23.16	21.95
CDY38591	Canola	nucleus	24.26	21.93
GSMUA_Achr10P...	Banana	nucleus	24.63	21.9
Bra036360.1-P	Field mustard	nucleus	22.43	21.71
GSMUA_Achr6P32030_001	Banana	nucleus	22.79	21.6
GSMUA_Achr7P14200_001	Banana	nucleus	22.79	21.6
KRH43430	Soybean	nucleus	26.84	21.6
Bra025170.1-P	Field mustard	nucleus	25.0	21.38
AT1G25470.1	Thale cress	nucleus	22.43	21.25
GSMUA_Achr10P...	Banana	nucleus	22.79	21.16
CDY13596	Canola	nucleus	24.63	21.14
CDX83568	Canola	nucleus	24.26	21.09
GSMUA_Achr6P14240_001	Banana	nucleus	21.69	21.07
KRH75373	Soybean	nucleus, plastid	28.68	21.02
GSMUA_Achr9P28840_001	Banana	nucleus	22.79	21.02
CDY42104	Canola	nucleus	13.6	20.67
Bra024743.1-P	Field mustard	plastid	25.37	20.66
KRH45262	Soybean	nucleus	27.57	20.6
CDY40978	Canola	nucleus	19.12	20.55
GSMUA_Achr9P05260_001	Banana	nucleus	22.06	20.55
GSMUA_Achr8P01690_001	Banana	nucleus	20.96	20.43
GSMUA_Achr8P19850_001	Banana	nucleus	25.0	20.36
AT3G25890.2	Thale cress	nucleus	24.63	20.18
OQU89260	Sorghum	nucleus	21.32	20.14
Os09t0309700-01	Rice	nucleus	23.53	20.13
GSMUA_Achr7P10720_001	Banana	nucleus	21.69	19.73
Solyc05g009450.1.1	Tomato	nucleus	24.26	19.35
PGSC0003DMT400041053	Potato	nucleus	25.0	19.21
KRH04558	Soybean	nucleus	26.1	19.14
Solyc04g007180.1.1	Tomato	nucleus	23.53	19.1
TraesCS5A01G180800.1	Wheat	nucleus	21.69	19.03
PGSC0003DMT400037698	Potato	nucleus	23.9	18.9
TraesCS5B01G178600.1	Wheat	nucleus	21.32	18.77
CDX99741	Canola	nucleus	21.69	18.73
TraesCS5D01G185300.1	Wheat	nucleus	21.32	18.71
HORVU5Hr1G055190.2	Barley	nucleus	20.96	18.45
Zm00001d020043_P001	Maize	plastid	25.0	17.71
Solyc03g119580.1.1	Tomato	nucleus	25.0	17.66
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	19.85	17.31
PGSC0003DMT400014358	Potato	nucleus	24.63	17.22
GSMUA_Achr10P...	Banana	vacuole	29.78	13.73

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G13800_001	EnsemblPlants:GSMUA_Achr4P13800_001	EnsemblPlants:GSMUA_Achr4T13800_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0SNP5	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF56	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00029522C0	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G13800_001]

Coordinates

chr4:+:10336885..10337703

Molecular Weight (calculated)

29744.0 Da

IEP (calculated)

5.553

GRAVY (calculated)

-0.543

Length

272 amino acids

Sequence
(BLAST)

001: MRRNRKTKKL DQLDSSGSNP TKKSEGSASF EPDLWKKTNG RIEAVRKVRV FFADPEATDS SGEDEDEKLG TRPKKRKRVL YEIALVPAPK ILKPPITSHL
101: KAPPKSVTSC NPAATETQKG VRQRRWGKWA AEIRDPIRGV RLWLGTYATV EAAAEAYRTA ACRIEEEKRG LLHQLWDTWD DGASAASSVS SSCVSAPAPP
201: SPSSVLDVSL SAKGKAVAAA DWLGEPVVPE MEFGLDEEPF LVGELGEDLI GLGDLPLWEQ QLDGGDFSFL DS

Best Arabidopsis Sequence Match ( AT1G68550.1 )
(BLAST)

001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS

Arabidopsis Description

ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.