Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P19850_001 | Banana | nucleus | 67.97 | 62.28 |
| GSMUA_Achr7P14200_001 | Banana | nucleus | 57.84 | 61.67 |
| GSMUA_Achr6P14240_001 | Banana | nucleus | 53.92 | 58.93 |
| GSMUA_Achr10P... | Banana | nucleus | 55.23 | 57.68 |
| GSMUA_Achr9P28840_001 | Banana | nucleus | 51.96 | 53.9 |
| GSMUA_Achr7P10720_001 | Banana | nucleus | 51.31 | 52.51 |
| GSMUA_Achr10P... | Banana | nucleus | 49.02 | 52.26 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 52.94 | 51.92 |
| GSMUA_Achr2P19950_001 | Banana | nucleus | 44.12 | 49.45 |
| GSMUA_Achr6P32030_001 | Banana | nucleus | 38.24 | 40.77 |
| GSMUA_Achr9P05260_001 | Banana | nucleus | 38.24 | 40.07 |
| Zm00001d008968_P001 | Maize | nucleus | 41.83 | 39.38 |
| Zm00001d039324_P001 | Maize | nucleus | 45.42 | 39.27 |
| TraesCS3D01G157100.1 | Wheat | nucleus | 42.81 | 37.64 |
| TraesCS3A01G149000.1 | Wheat | nucleus | 42.81 | 37.32 |
| TraesCS3B01G176200.1 | Wheat | nucleus | 42.81 | 37.32 |
| HORVU3Hr1G030310.1 | Barley | nucleus | 42.81 | 37.11 |
| GSMUA_Achr7P21980_001 | Banana | nucleus | 29.41 | 36.44 |
| GSMUA_Achr4P16600_001 | Banana | nucleus | 29.41 | 36.44 |
| KXG31528 | Sorghum | nucleus | 45.42 | 35.46 |
| Os01t0224100-01 | Rice | nucleus | 43.14 | 34.74 |
| GSMUA_Achr5P27850_001 | Banana | nucleus, plastid | 30.07 | 34.07 |
| GSMUA_Achr8P01690_001 | Banana | nucleus | 28.76 | 31.54 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 22.22 | 27.42 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 21.24 | 25.59 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 21.9 | 24.63 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 20.91 | 21.99 |
| GSMUA_Achr10P... | Banana | vacuole | 21.9 | 11.36 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr10G01110_001 | EnsemblPlants:GSMUA_Achr10P01110_001 | EnsemblPlants:GSMUA_Achr10T01110_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0RED8 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF40 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002950B3F | SEG:seg |
Description
Putative AP2 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr10G01110_001]
Coordinates
chr10:-:1934654..1935574
Molecular Weight (calculated)
33744.4 Da
IEP (calculated)
7.349
GRAVY (calculated)
-0.570
Length
306 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAAFLVPVK RTEQVVVVTT SKPLAPPPRT VRVFCNDYDA TDSSGDEGEF CRSRRRVRRY VQEIRFEAHR NAAVGKSKAV GKKRKAKPAV ASGGEDGVRR
101: FRGVRRRPWG KYAAEIRDPW RRVRVWLGTY DTAEEAAKVY DSAAIRLRGP DATTNFARPP PPPPPTKNLN LTPVSGRYDS AEDPRNLSSP TSVLRGFSTC
201: SAAAETKTSD PEERRKPPVE QGGFLPPEEE EEAFFVDLLG FGASDPVSFF YDGSAEVGSL ADDSRDGFFL GSRLDLLELS STWQTGDGLF ADLGDFFPIE
301: LHPAAI
101: FRGVRRRPWG KYAAEIRDPW RRVRVWLGTY DTAEEAAKVY DSAAIRLRGP DATTNFARPP PPPPPTKNLN LTPVSGRYDS AEDPRNLSSP TSVLRGFSTC
201: SAAAETKTSD PEERRKPPVE QGGFLPPEEE EEAFFVDLLG FGASDPVSFF YDGSAEVGSL ADDSRDGFFL GSRLDLLELS STWQTGDGLF ADLGDFFPIE
301: LHPAAI
001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
Arabidopsis Description
CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.