Factsheet for GSMUA_Achr9P28840_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P10720_001	Banana	nucleus	61.36	60.54
GSMUA_Achr6P14240_001	Banana	nucleus	57.29	60.36
GSMUA_Achr7P14200_001	Banana	nucleus	57.97	59.58
GSMUA_Achr10P...	Banana	nucleus	56.61	57.0
GSMUA_Achr10P...	Banana	nucleus	53.56	55.05
GSMUA_Achr10P...	Banana	nucleus	53.9	51.96
GSMUA_Achr8P19850_001	Banana	nucleus	56.61	50.0
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	51.86	49.04
GSMUA_Achr2P19950_001	Banana	nucleus	42.71	46.15
GSMUA_Achr9P05260_001	Banana	nucleus	38.64	39.04
GSMUA_Achr6P32030_001	Banana	nucleus	37.29	38.33
GSMUA_Achr7P21980_001	Banana	nucleus	31.53	37.65
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	32.88	35.93
GSMUA_Achr4P16600_001	Banana	nucleus	29.15	34.82
GSMUA_Achr8P01690_001	Banana	nucleus	30.85	32.62
GSMUA_Achr4P06840_001	Banana	nucleus	22.03	25.59
GSMUA_Achr9P19330_001	Banana	mitochondrion	20.34	24.19
GSMUA_Achr4P13800_001	Banana	nucleus	21.02	22.79
GSMUA_Achr1P23090_001	Banana	nucleus	19.66	19.93
GSMUA_Achr10P...	Banana	vacuole	20.34	10.17

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G28840_001	EnsemblPlants:GSMUA_Achr9P28840_001	EnsemblPlants:GSMUA_Achr9T28840_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0U4E1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF42	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000294BAF2	SEG:seg

Description

Putative Ethylene-responsive transcription factor CRF1 [Source:GMGC_GENE;Acc:GSMUA_Achr9G28840_001]

Coordinates

chr9:-:32698297..32699307

Molecular Weight (calculated)

32522.0 Da

IEP (calculated)

5.152

GRAVY (calculated)

-0.540

Length

295 amino acids

Sequence
(BLAST)

001: METTLLLPVK RTEHVHVTPK PLAPRRPEHA HAHKPRTVRI YCEDLDATDS SGDDEEEPEC RTLRRVRRYV QEIRFEVRPS PVCTSSKASK GAAATGRKRK
101: AAAAADVADA DDGDRSVKRF RGVRRRPWGK YAAEIRDPWR RVRVWLGTFD TAEEAAKVYD SAAIKLRGPG AATNFSQPAV DISPAGPPPN KHLPDDNLAS
201: AAEAPASASE RSRPDQLVDI LPFEEVPLFD EILGLSHSRP SYFDDSAPIG FLAEEMSDAL FGAGLDLDLG LSTWQADDYF EDIGDLFPIE ALPAL

Best Arabidopsis Sequence Match ( AT4G23750.1 )
(BLAST)

001: MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV

Arabidopsis Description

CRF2Ethylene-responsive transcription factor CRF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.