Factsheet for GSMUA_Achr10P14570_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 5
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P14240_001	Banana	nucleus	67.95	75.71
GSMUA_Achr7P14200_001	Banana	nucleus	54.17	58.88
GSMUA_Achr10P...	Banana	nucleus	52.88	56.31
GSMUA_Achr7P10720_001	Banana	nucleus	50.96	53.18
GSMUA_Achr10P...	Banana	nucleus	51.92	52.94
GSMUA_Achr9P28840_001	Banana	nucleus	49.04	51.86
GSMUA_Achr10P...	Banana	nucleus	46.47	50.52
GSMUA_Achr8P19850_001	Banana	nucleus	53.85	50.3
GSMUA_Achr2P19950_001	Banana	nucleus	41.03	46.89
GSMUA_Achr9P05260_001	Banana	nucleus	35.26	37.67
Zm00001d008968_P001	Maize	nucleus	38.78	37.23
GSMUA_Achr6P32030_001	Banana	nucleus	33.65	36.59
HORVU3Hr1G030310.1	Barley	nucleus	40.38	35.69
Zm00001d039324_P001	Maize	nucleus	40.06	35.31
GSMUA_Achr4P16600_001	Banana	nucleus	27.88	35.22
TraesCS3D01G157100.1	Wheat	nucleus	39.1	35.06
TraesCS3A01G149000.1	Wheat	nucleus	39.42	35.04
TraesCS3B01G176200.1	Wheat	nucleus	39.42	35.04
GSMUA_Achr7P21980_001	Banana	nucleus	27.24	34.41
Os01t0224100-01	Rice	nucleus	39.42	32.37
KXG31528	Sorghum	nucleus	40.38	32.14
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	26.92	31.11
GSMUA_Achr8P01690_001	Banana	nucleus	25.64	28.67
GSMUA_Achr9P19330_001	Banana	mitochondrion	18.59	23.39
GSMUA_Achr4P06840_001	Banana	nucleus	18.59	22.83
GSMUA_Achr4P13800_001	Banana	nucleus	17.31	19.85
GSMUA_Achr1P23090_001	Banana	nucleus	18.27	19.59
GSMUA_Achr10P...	Banana	vacuole	22.12	11.69

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr10G14570_001	EnsemblPlants:GSMUA_Achr10P14570_001	EnsemblPlants:GSMUA_Achr10T14570_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0RI83	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF42	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295D71A	SEG:seg

Description

Putative Ethylene-responsive transcription factor CRF2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G14570_001]

Coordinates

chr10:+:22768097..22769188

Molecular Weight (calculated)

34560.8 Da

IEP (calculated)

7.977

GRAVY (calculated)

-0.500

Length

312 amino acids

Sequence
(BLAST)

001: MMRGLCVFFD LITGKKRKLM RGNLNRTENS YLGAMDVTLL MVPIKRTEHI DVTQKTLPWG QYHRHSDVAR PSTIRIFCDD YDATDSSGDE GCRRRVRRYV
101: QEVRFQARFE AVGKSKPARK RKAAGPAVAA SSSGEAERRF RGVRRRPWGK YAAEIRDPLR RVRVWLGTYD TAEEAAKVYD SAAIQLRGPD ATTNFSRPPA
201: AAASTAPPKK CLSSSNLTSI SGGHDSSEES LPGQLSGLLP FDEAMLHDEF HDLGATKPSL FDDDARVGPL AGDLNDIFLG TDLDFGSSTW QGGDDYFQDI
301: VDLFPIEPLA AV

Best Arabidopsis Sequence Match ( AT4G23750.1 )
(BLAST)

001: MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV

Arabidopsis Description

CRF2Ethylene-responsive transcription factor CRF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.