Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 75.71 | 67.95 |
| GSMUA_Achr7P14200_001 | Banana | nucleus | 60.36 | 58.88 |
| GSMUA_Achr9P28840_001 | Banana | nucleus | 60.36 | 57.29 |
| GSMUA_Achr10P... | Banana | nucleus | 58.93 | 56.31 |
| GSMUA_Achr10P... | Banana | nucleus | 58.93 | 53.92 |
| GSMUA_Achr8P19850_001 | Banana | nucleus | 63.93 | 53.59 |
| GSMUA_Achr7P10720_001 | Banana | nucleus | 56.79 | 53.18 |
| GSMUA_Achr2P19950_001 | Banana | nucleus | 50.0 | 51.28 |
| GSMUA_Achr10P... | Banana | nucleus | 52.14 | 50.87 |
| GSMUA_Achr9P05260_001 | Banana | nucleus | 40.36 | 38.7 |
| GSMUA_Achr6P32030_001 | Banana | nucleus | 39.64 | 38.68 |
| GSMUA_Achr7P21980_001 | Banana | nucleus | 32.5 | 36.84 |
| Zm00001d039324_P001 | Maize | nucleus | 46.07 | 36.44 |
| GSMUA_Achr4P16600_001 | Banana | nucleus | 32.14 | 36.44 |
| Zm00001d008968_P001 | Maize | nucleus | 41.43 | 35.69 |
| HORVU3Hr1G030310.1 | Barley | nucleus | 42.86 | 33.99 |
| TraesCS3D01G157100.1 | Wheat | nucleus | 41.79 | 33.62 |
| TraesCS3A01G149000.1 | Wheat | nucleus | 42.14 | 33.62 |
| TraesCS3B01G176200.1 | Wheat | nucleus | 42.14 | 33.62 |
| GSMUA_Achr5P27850_001 | Banana | nucleus, plastid | 32.14 | 33.33 |
| KXG31528 | Sorghum | nucleus | 45.0 | 32.14 |
| Os01t0224100-01 | Rice | nucleus | 43.21 | 31.84 |
| GSMUA_Achr8P01690_001 | Banana | nucleus | 29.64 | 29.75 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 22.86 | 25.2 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 20.36 | 22.98 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 21.07 | 21.69 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 20.71 | 19.93 |
| GSMUA_Achr10P... | Banana | vacuole | 22.5 | 10.68 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr6G14240_001 | EnsemblPlants:GSMUA_Achr6P14240_001 | EnsemblPlants:GSMUA_Achr6T14240_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0T6X2 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF42 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295EE65 | SEG:seg |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G14240_001]
Coordinates
chr6:-:9386191..9387180
Molecular Weight (calculated)
30964.5 Da
IEP (calculated)
7.199
GRAVY (calculated)
-0.513
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVTLLMVPT KRTEHVDVTP KTLPLLHPKH RHCDAARPRT VRIFCDDHDA TDSSGDEGDR RRVRRYVQEI RFEARPQAAG KSKPARKRKT AALAATEAGS
101: GDAERRFRGV RRRPWGKYAA EIRDPWRRVR VWLGTYDTAE EAAKVYDSAA IRLRGPDATT NFSHPMAAAQ PPPQPPPKKC PSNSNLTFIS GGMLTAGIIP
201: GQLSGFLPFE EAMLHDNFLD FGAAEPSLFD DSAQIGFIAG DLSQTFIGSD LDFGSSTWQA GDDYFQDIAD LFPIEPLAAV
101: GDAERRFRGV RRRPWGKYAA EIRDPWRRVR VWLGTYDTAE EAAKVYDSAA IRLRGPDATT NFSHPMAAAQ PPPQPPPKKC PSNSNLTFIS GGMLTAGIIP
201: GQLSGFLPFE EAMLHDNFLD FGAAEPSLFD DSAQIGFIAG DLSQTFIGSD LDFGSSTWQA GDDYFQDIAD LFPIEPLAAV
001: METEKKVSLP RILRISVTDP YATDSSSDEE EEVDFDALST KRRRVKKYVK EVVLDSVVSD KEKPMKKKRK KRVVTVPVVV TTATRKFRGV RQRPWGKWAA
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
Arabidopsis Description
CRF1Ethylene-responsive transcription factor CRF1 [Source:UniProtKB/Swiss-Prot;Acc:O82503]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.