Factsheet for GSMUA_Achr2P19950_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P14240_001	Banana	nucleus	51.28	50.0
GSMUA_Achr10P...	Banana	nucleus	47.25	44.95
GSMUA_Achr10P...	Banana	nucleus	49.45	44.12
GSMUA_Achr8P19850_001	Banana	nucleus	53.85	44.01
GSMUA_Achr9P28840_001	Banana	nucleus	46.15	42.71
GSMUA_Achr10P...	Banana	nucleus	45.79	42.66
GSMUA_Achr7P14200_001	Banana	nucleus	44.32	42.16
GSMUA_Achr7P10720_001	Banana	nucleus	46.15	42.14
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	46.89	41.03
GSMUA_Achr6P32030_001	Banana	nucleus	41.39	39.37
GSMUA_Achr9P05260_001	Banana	nucleus	41.03	38.36
Zm00001d008968_P001	Maize	nucleus	43.59	36.62
Zm00001d039324_P001	Maize	nucleus	47.25	36.44
GSMUA_Achr7P21980_001	Banana	nucleus	32.6	36.03
GSMUA_Achr4P16600_001	Banana	nucleus	31.87	35.22
TraesCS3D01G157100.1	Wheat	nucleus	43.59	34.2
TraesCS3A01G149000.1	Wheat	nucleus	43.96	34.19
HORVU3Hr1G030310.1	Barley	nucleus	43.96	33.99
TraesCS3B01G176200.1	Wheat	nucleus	43.59	33.9
KXG31528	Sorghum	nucleus	46.89	32.65
Os01t0224100-01	Rice	nucleus	45.05	32.37
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	31.14	31.48
GSMUA_Achr8P01690_001	Banana	nucleus	30.77	30.11
GSMUA_Achr9P19330_001	Banana	mitochondrion	22.34	24.6
GSMUA_Achr4P06840_001	Banana	nucleus	22.71	24.41
GSMUA_Achr4P13800_001	Banana	nucleus	21.98	22.06
GSMUA_Achr1P23090_001	Banana	nucleus	21.61	20.27
GSMUA_Achr10P...	Banana	vacuole	23.81	11.02

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr2G19950_001	EnsemblPlants:GSMUA_Achr2P19950_001	EnsemblPlants:GSMUA_Achr2T19950_001
InterPro:IPR001471	InterPro:IPR036955	UniProt:M0S9I6	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF42	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000295D4BD	SEG:seg

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G19950_001]

Coordinates

chr2:-:19907639..19908460

Molecular Weight (calculated)

29843.9 Da

IEP (calculated)

5.499

GRAVY (calculated)

-0.566

Length

273 amino acids

Sequence
(BLAST)

001: MEGTLSKGCM KRTEHVDVTP KPLPPRSQER TVRIFCDDYD ATDSSGDEVD RRGAVRRYVQ EIRFEPRPAG GRKGKPARKR KKVDASGVSA CGKAGPVFRG
101: VRRRPSGKYA AEIRDPWRRV RVWLGTYDTA EEAAMVYDSA AVRLRGTDAT TNFSAAPSSL TPHEKCPLGT DLTSTTGGFD YSRKSHNLSS LTSVLRDVFS
201: SFADENGGLL TTDITIPDGV VGDFLPFEEA MPSLFDDPTE TLTGGLFGSE PFKEDDCFQG DGDLFPIESL TAV

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.