Factsheet for Zm00001d008968_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31528	Sorghum	nucleus	75.08	62.24
Zm00001d039324_P001	Maize	nucleus	67.08	61.58
TraesCS3A01G149000.1	Wheat	nucleus	60.62	56.13
TraesCS3B01G176200.1	Wheat	nucleus	60.62	56.13
TraesCS3D01G157100.1	Wheat	nucleus	59.69	55.75
HORVU3Hr1G030310.1	Barley	nucleus	60.0	55.24
Os01t0224100-01	Rice	nucleus	63.69	54.47
GSMUA_Achr2P19950_001	Banana	nucleus	36.62	43.59
GSMUA_Achr10P...	Banana	nucleus	39.38	41.83
GSMUA_Achr6P14240_001	Banana	nucleus	35.69	41.43
GSMUA_Achr8P19850_001	Banana	nucleus	42.15	41.02
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	37.23	38.78
Zm00001d044004_P001	Maize	nucleus	32.92	35.79
Zm00001d011499_P001	Maize	nucleus	32.62	34.98
Zm00001d036251_P001	Maize	nucleus	31.38	32.38
Zm00001d052365_P001	Maize	nucleus	20.31	30.56
Zm00001d045262_P001	Maize	nucleus	29.54	30.48
Zm00001d042588_P001	Maize	nucleus	24.31	26.42
Zm00001d034605_P001	Maize	nucleus	18.77	25.63
Zm00001d019216_P001	Maize	nucleus	16.31	20.31
Zm00001d005203_P001	Maize	nucleus	17.23	19.24
Zm00001d020043_P001	Maize	plastid	21.23	17.97

Protein Annotations

EntrezGene:103634995	MapMan:15.5.7.1	Gene3D:3.30.730.10	ProteinID:AIB05007.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQK91089.1	ncoils:Coil	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K7URF4	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF42	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000220A9D9
EnsemblPlantsGene:Zm00001d008968	EnsemblPlants:Zm00001d008968_P001	EnsemblPlants:Zm00001d008968_T001	SEG:seg	:	:

Description

AP2-EREBP-transcription factor 96Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr8:+:27760205..27761182

Molecular Weight (calculated)

35765.4 Da

IEP (calculated)

4.432

GRAVY (calculated)

-0.532

Length

325 amino acids

Sequence
(BLAST)

001: MWPMEEEEVF VTVRRTEHVD VTSRAVVVAA GRAAVAGPRT VRVFCDDYDA TDSSGDEAEE EEEKKAARRR VKRYVQEIHL ERAAKEEEEA TAAASLGAVL
101: PGPKRKRKPD GEASEPRFRG VRRRPWGKYA AEIRDPWRRV RVWLGTFDTA EEAAKVYDSA AVQLRGRDAT TNFQQQVDPE RLSQPAASKS AATSTYDSGE
201: ESVTAVASPT SVLRSFPPSA DAGGTRSKAA ARNPETGDST IVFGCPFSLA SELPALYTEF DLLADLPLDF LADAPEVEAL SLPPFSACTP EEEEECPSDA
301: VRWRQVDELF QDITDLFQID PLPVA

Best Arabidopsis Sequence Match ( AT4G23750.1 )
(BLAST)

001: MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV

Arabidopsis Description

CRF2Ethylene-responsive transcription factor CRF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.