Factsheet for Zm00001d045262_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER89242	Sorghum	nucleus, plastid	77.46	73.05
Zm00001d036251_P001	Maize	nucleus	66.98	66.98
TraesCS7A01G120100.1	Wheat	nucleus	38.41	38.05
TraesCS7D01G118000.1	Wheat	nucleus	38.1	37.04
TraesCS7B01G018400.1	Wheat	nucleus	37.78	36.96
Zm00001d052365_P001	Maize	nucleus	21.59	31.48
GSMUA_Achr6P32030_001	Banana	nucleus	28.25	31.01
GSMUA_Achr9P05260_001	Banana	nucleus	28.57	30.82
Zm00001d039324_P001	Maize	nucleus	34.29	30.51
Zm00001d008968_P001	Maize	nucleus	30.48	29.54
Zm00001d044004_P001	Maize	nucleus	26.03	27.42
Zm00001d011499_P001	Maize	nucleus	26.35	27.39
Zm00001d034605_P001	Maize	nucleus	20.0	26.47
Zm00001d042588_P001	Maize	nucleus	23.49	24.75
Zm00001d005203_P001	Maize	nucleus	18.41	19.93
Zm00001d019216_P001	Maize	nucleus	16.19	19.54
Zm00001d020043_P001	Maize	plastid	21.59	17.71

Protein Annotations

EntrezGene:103638043	MapMan:15.5.7.1	Gene3D:3.30.730.10	ProteinID:AIB05170.1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQL01925.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:K7V6M6	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF42	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000221B48C	EnsemblPlantsGene:Zm00001d045262
EnsemblPlants:Zm00001d045262_P001	EnsemblPlants:Zm00001d045262_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 175Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr9:-:17416763..17417710

Molecular Weight (calculated)

32988.5 Da

IEP (calculated)

4.754

GRAVY (calculated)

-0.381

Length

315 amino acids

Sequence
(BLAST)

001: MVEAAAVSRS RPKIKQEPAE TTAICKLVRV FCDDRDSTDS SGDEAAAGGG AGAAAGARKF LVEISVEKHQ PRCNAMAPAG RAAGGGKRKA AAAGTPAEPR
101: YRGVRRRPWG RYAAEIRDPH KGERLWLGTF DTAEEAARRY DSETRRLRGP SAITNFPATP DDRVPLPAPA LSLHGVAAVG EHSSAEEESC DESQLVVGSP
201: VSVLRAMPDE TARATLPPKI ADAAAGCATK KDAPDGRGGL SPFSADDALL PQLGEDAFSF GGVPFDDDLP TPQLGLDYLA ADPALDLGSL PMWPGVDGCR
301: FSDIGDDDLF SLPAL

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.