Factsheet for Zm00001d044004_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011499_P001	Maize	nucleus	84.62	83.5
EES03374	Sorghum	nucleus	90.3	82.57
TraesCS3A01G238300.1	Wheat	nucleus	72.24	73.22
TraesCS3D01G238600.1	Wheat	nucleus	71.57	73.04
TraesCS3B01G266800.1	Wheat	nucleus	71.24	72.7
Os01t0657400-00	Rice	nucleus	70.9	72.6
HORVU3Hr1G059250.1	Barley	nucleus	70.9	71.86
GSMUA_Achr6P32030_001	Banana	nucleus	44.48	46.34
GSMUA_Achr9P05260_001	Banana	nucleus	43.48	44.52
Zm00001d039324_P001	Maize	nucleus	40.13	33.9
Zm00001d008968_P001	Maize	nucleus	35.79	32.92
Zm00001d052365_P001	Maize	nucleus	22.07	30.56
Zm00001d034605_P001	Maize	nucleus	23.08	28.99
Zm00001d036251_P001	Maize	nucleus	29.1	27.62
Zm00001d045262_P001	Maize	nucleus	27.42	26.03
Zm00001d042588_P001	Maize	nucleus	24.41	24.41
Zm00001d019216_P001	Maize	nucleus	19.06	21.84
Zm00001d005203_P001	Maize	nucleus	19.4	19.93
Zm00001d020043_P001	Maize	plastid	20.4	15.89

Protein Annotations

EntrezGene:100192050	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	UniProt:B4FAH2
EMBL:BT034110	EMBL:BT034337	EMBL:BT055241	InterPro:DNA-bd_dom_sf	EMBL:EU957518	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EMBL:KJ727587
ProteinID:ONM39663.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF37
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00017B6083	EnsemblPlantsGene:Zm00001d044004	EnsemblPlants:Zm00001d044004_P001	EnsemblPlants:Zm00001d044004_T001
SEG:seg	:	:	:	:	:

Description

AP2-EREBP-transcription factor 208Ethylene-responsive transcription factor CRF4

Coordinates

chr3:+:216213660..216214559

Molecular Weight (calculated)

31720.5 Da

IEP (calculated)

4.506

GRAVY (calculated)

-0.452

Length

299 amino acids

Sequence
(BLAST)

001: MSRPRTVRIF WDDPDLTDSS SEEEGCGTRR VGRMVRELPP MAGAAAAAPV PDQCNAGDGD RGRRLGVAAP GACSGARRRL AKTGPSTKFR GVRRRPWGKF
101: AAEIRDPWRG VRVWLGTFDT AEEAARVYDT AAIQLRGANA TTNFSAAANS GSRAGQRDPA TPGYESGTES SPAASSPTSV LRKVPSLSSL AEDDSCAAPC
201: EPAAGCRSLA VLEEEELGQF VPFEDAPVYA TSGFWDFEPD AGFLYAEPSS PEASWNAAAA AEPASSDDAP SWAASPVQEN DYFQGLRDLF PLNPLPAIF

Best Arabidopsis Sequence Match ( AT4G11140.1 )
(BLAST)

001: METEKKVSLP RILRISVTDP YATDSSSDEE EEVDFDALST KRRRVKKYVK EVVLDSVVSD KEKPMKKKRK KRVVTVPVVV TTATRKFRGV RQRPWGKWAA
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV

Arabidopsis Description

CRF1Ethylene-responsive transcription factor CRF1 [Source:UniProtKB/Swiss-Prot;Acc:O82503]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.