Factsheet for Zm00001d020043_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98690	Sorghum	nucleus	62.76	85.46
Os09t0309700-01	Rice	nucleus	43.75	52.83
TraesCS5B01G178600.1	Wheat	nucleus	37.5	46.6
TraesCS5D01G185300.1	Wheat	nucleus	37.24	46.13
HORVU5Hr1G055190.2	Barley	nucleus	36.98	45.95
TraesCS5A01G180800.1	Wheat	nucleus	36.98	45.81
KRH41626	Soybean	nucleus	12.5	29.09
GSMUA_Achr9P19330_001	Banana	mitochondrion	17.19	26.61
GSMUA_Achr4P06840_001	Banana	nucleus	17.45	26.38
CDX84990	Canola	nucleus	16.67	25.81
CDY42104	Canola	nucleus	11.72	25.14
GSMUA_Achr4P13800_001	Banana	nucleus	17.71	25.0
Zm00001d052365_P001	Maize	nucleus	13.8	24.54
KRH39204	Soybean	nucleus	10.68	24.26
AT1G25470.1	Thale cress	nucleus	17.45	23.34
AT1G68550.2	Thale cress	nucleus	19.53	23.15
CDY38591	Canola	nucleus	17.97	22.92
CDY07380	Canola	nucleus	18.49	22.54
Bra004033.1-P	Field mustard	nucleus	18.49	22.4
Bra004318.1-P	Field mustard	nucleus	17.71	22.37
CDX96010	Canola	nucleus	17.71	22.37
KRH48474	Soybean	nucleus	18.23	22.36
GSMUA_Achr1P23090_001	Banana	nucleus	16.93	22.34
CDY04234	Canola	nucleus	18.23	22.08
CDY65135	Canola	nucleus	17.97	22.04
CDY44887	Canola	nucleus	17.97	21.84
Bra033923.1-P	Field mustard	nucleus	17.97	21.84
Bra036360.1-P	Field mustard	nucleus	15.89	21.71
Zm00001d045262_P001	Maize	nucleus	17.71	21.59
Bra024743.1-P	Field mustard	plastid	18.75	21.56
Zm00001d008968_P001	Maize	nucleus	17.97	21.23
Zm00001d036251_P001	Maize	nucleus	17.19	20.95
Zm00001d011499_P001	Maize	nucleus	16.41	20.79
KRH43430	Soybean	nucleus	18.23	20.71
CDY40978	Canola	nucleus	13.54	20.55
Zm00001d044004_P001	Maize	nucleus	15.89	20.4
KRG90812	Soybean	nucleus	19.53	20.38
Zm00001d039324_P001	Maize	nucleus	18.75	20.34
VIT_01s0011g03470.t01	Wine grape	nucleus	16.93	20.31
KRH35957	Soybean	nucleus	18.75	20.28
Zm00001d034605_P001	Maize	nucleus	12.5	20.17
KRH45262	Soybean	nucleus	18.75	19.78
KRH75373	Soybean	nucleus, plastid	18.49	19.14
CDX83568	Canola	nucleus	15.36	18.85
Solyc05g009450.1.1	Tomato	nucleus	16.67	18.77
PGSC0003DMT400037698	Potato	nucleus	16.67	18.6
CDY13596	Canola	nucleus	15.1	18.3
Bra025170.1-P	Field mustard	nucleus	15.1	18.24
CDX99741	Canola	nucleus	14.84	18.1
Zm00001d042588_P001	Maize	nucleus	14.06	18.06
AT3G25890.2	Thale cress	nucleus	15.36	17.77
KRH04558	Soybean	nucleus	16.67	17.25
Solyc04g007180.1.1	Tomato	nucleus	14.84	17.01
PGSC0003DMT400041053	Potato	nucleus	15.62	16.95
Zm00001d019216_P001	Maize	nucleus	11.2	16.48
Zm00001d005203_P001	Maize	nucleus	12.24	16.15
Solyc03g119580.1.1	Tomato	nucleus	16.15	16.1
PGSC0003DMT400014358	Potato	nucleus	16.15	15.94
GSMUA_Achr10P...	Banana	vacuole	17.71	11.53

Protein Annotations

EntrezGene:100272413	MapMan:15.5.7.1	Gene3D:3.30.730.10	UniProt:A0A1D6I1S3	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	ProteinID:ONM54158.1	ProteinID:ONM54159.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF7	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0008427877	EnsemblPlantsGene:Zm00001d020043
EnsemblPlants:Zm00001d020043_P001	EnsemblPlants:Zm00001d020043_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 94Ethylene-responsive transcription factor ERF117

Coordinates

chr7:-:88466229..88468869

Molecular Weight (calculated)

42477.2 Da

IEP (calculated)

4.779

GRAVY (calculated)

-0.306

Length

384 amino acids

Sequence
(BLAST)

001: MSPALLPLHG SELTSSASSS CSFLQPGQGG ARDCGFRFRI SGCKYNTNME VAMTQLINFL PCTALASYFA APEIVKEFKN PPQITVSLGS HLWSIWKRCV
101: KMRPSVQKVR IFCSDPDATD SSDDEDGQII AVKKMVMEIL VPVTNSKTSN SLKTLVPCGA KDLEVSEKKG KSSRFRGVRR RRWGRWAAEI RDPVRKTRKW
201: IGSYDSEEAA AAAYQAYAKQ IREELLAIKN QRSVSERAAL SSSSSVSCVS SSPPCEQTGH EPQTRVLVEK DPEPVDEVFL NFSLTPKGIS MDDLLGRIDE
301: IPVCDDPVSP TDELPLDNFT SLEDAFPISD FIGSRDEHLY EHYIGLADIS HLPLPMDDPA FNLDAELDWS GFDFAAIEGE LDVL

Best Arabidopsis Sequence Match ( AT1G68550.1 )
(BLAST)

001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS

Arabidopsis Description

ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.