Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY42104 | Canola | nucleus | 68.15 | 94.41 |
| Bra024743.1-P | Field mustard | plastid | 90.73 | 67.37 |
| AT1G68550.2 | Thale cress | nucleus | 50.81 | 38.89 |
| CDY65135 | Canola | nucleus | 47.98 | 38.02 |
| CDY44887 | Canola | nucleus | 47.98 | 37.66 |
| CDY38591 | Canola | nucleus | 45.16 | 37.21 |
| CDX96010 | Canola | nucleus | 44.76 | 36.51 |
| CDY40978 | Canola | nucleus | 36.69 | 35.97 |
| CDY07380 | Canola | nucleus | 45.56 | 35.87 |
| CDY04234 | Canola | nucleus | 45.56 | 35.65 |
| CDX83568 | Canola | nucleus | 43.95 | 34.82 |
| CDY13596 | Canola | nucleus | 43.95 | 34.38 |
| CDX99741 | Canola | nucleus | 40.73 | 32.06 |
| CDY70837 | Canola | nucleus | 18.15 | 30.61 |
| CDY41468 | Canola | nucleus | 18.95 | 29.75 |
| CDY12500 | Canola | nucleus | 18.55 | 29.68 |
| CDY66105 | Canola | nucleus | 19.76 | 29.34 |
| CDY09516 | Canola | nucleus | 19.35 | 29.27 |
| CDX91694 | Canola | nucleus | 18.95 | 29.19 |
| CDX68325 | Canola | nucleus | 19.35 | 29.09 |
| CDY49223 | Canola | nucleus | 19.35 | 29.09 |
| VIT_01s0011g03470.t01 | Wine grape | nucleus | 36.69 | 28.44 |
| KRH35957 | Soybean | nucleus | 39.52 | 27.61 |
| KRH43430 | Soybean | nucleus | 34.68 | 25.44 |
| PGSC0003DMT400037698 | Potato | nucleus | 35.08 | 25.29 |
| Solyc05g009450.1.1 | Tomato | nucleus | 34.68 | 25.22 |
| KRH45262 | Soybean | nucleus | 36.29 | 24.73 |
| KRG90812 | Soybean | nucleus | 36.29 | 24.46 |
| Solyc04g007180.1.1 | Tomato | nucleus | 32.26 | 23.88 |
| KRH75373 | Soybean | nucleus, plastid | 35.08 | 23.45 |
| PGSC0003DMT400041053 | Potato | nucleus | 33.47 | 23.45 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 23.39 | 22.83 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 22.58 | 22.58 |
| KRH04558 | Soybean | nucleus | 32.66 | 21.83 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 23.79 | 21.69 |
| CDY10965 | Canola | nucleus | 25.81 | 21.62 |
| EER98690 | Sorghum | nucleus | 24.19 | 21.28 |
| OQU89260 | Sorghum | nucleus | 24.6 | 21.18 |
| CDY11369 | Canola | nucleus | 23.79 | 20.85 |
| CDX71724 | Canola | nucleus | 24.19 | 20.83 |
| Os09t0309700-01 | Rice | nucleus | 26.61 | 20.75 |
| CDX94215 | Canola | nucleus | 26.21 | 20.7 |
| CDY47623 | Canola | nucleus | 26.21 | 20.63 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 24.19 | 20.62 |
| CDX80006 | Canola | nucleus | 22.18 | 20.45 |
| CDY52005 | Canola | nucleus | 23.39 | 20.21 |
| CDY03521 | Canola | nucleus | 26.21 | 20.19 |
| CDY42030 | Canola | nucleus | 21.77 | 19.78 |
| TraesCS5B01G178600.1 | Wheat | nucleus | 24.6 | 19.74 |
| HORVU5Hr1G055190.2 | Barley | nucleus | 24.6 | 19.74 |
| CDY53906 | Canola | nucleus | 22.58 | 19.72 |
| TraesCS5A01G180800.1 | Wheat | nucleus | 24.6 | 19.68 |
| TraesCS5D01G185300.1 | Wheat | nucleus | 24.19 | 19.35 |
| CDY05133 | Canola | nucleus | 20.97 | 18.77 |
| CDX90774 | Canola | nucleus | 20.97 | 18.77 |
| CDX95687 | Canola | nucleus | 18.55 | 18.11 |
| CDX92852 | Canola | nucleus | 22.98 | 17.59 |
| CDY29870 | Canola | nucleus | 22.98 | 17.54 |
| CDX97406 | Canola | nucleus | 22.98 | 17.38 |
| CDY14263 | Canola | nucleus | 22.98 | 17.38 |
| CDY47066 | Canola | nucleus | 23.79 | 17.25 |
| CDY54340 | Canola | nucleus | 23.39 | 17.21 |
| Zm00001d020043_P001 | Maize | plastid | 25.81 | 16.67 |
| CDY71170 | Canola | nucleus | 22.58 | 16.62 |
| CDY49175 | Canola | nucleus | 23.39 | 16.52 |
| CDX96208 | Canola | nucleus | 22.98 | 16.33 |
| CDY61587 | Canola | nucleus | 23.79 | 16.3 |
| CDY71485 | Canola | nucleus | 21.77 | 16.02 |
| GSMUA_Achr10P... | Banana | vacuole | 25.81 | 10.85 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078D797 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf |
| EnsemblPlants:CDX84990 | ProteinID:CDX84990 | ProteinID:CDX84990.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00142401001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PIRSF:PIRSF038123 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF21 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EAFF5E | SEG:seg | : | : | : | : |
Description
BnaC05g20650D
Coordinates
chrLK031839:-:1244534..1245446
Molecular Weight (calculated)
27577.4 Da
IEP (calculated)
5.077
GRAVY (calculated)
-0.463
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MKKSVRGRKV RIIVSDPYAT DDSSSDEWFE CKPPKVKRIV HEINLPFQLS ESSQYHKSCR RKAASMQLNK PVGVRLRQSG KWAAEIRNPL TKTKVWLGTY
101: ATLEEAGKAY ADKKVEFDAS VASANSQCLR SAASKEKVCL SKDVAASGDL TKEGFDLSQL EIPDLSFLAA EEKSGAKAAG EIDFDCFFKD EDYDHLFDDF
201: SVVDNVNNIS LPSELPDCDF TDVELEHGDM KFAFADQLAH PPLNIACP
101: ATLEEAGKAY ADKKVEFDAS VASANSQCLR SAASKEKVCL SKDVAASGDL TKEGFDLSQL EIPDLSFLAA EEKSGAKAAG EIDFDCFFKD EDYDHLFDDF
201: SVVDNVNNIS LPSELPDCDF TDVELEHGDM KFAFADQLAH PPLNIACP
001: MKSFVKPERD SLLRTVRIVF TDPDATDDSS SSSDEWLPKP RKVKRFVHEI TFLPQVSESS QDRSNAVKTP RRKSTRQFKY PVGVRPRPSG KFAAEILNPF
101: TKTKKWLGTY ETPAEAEKAY VDKKVEYDAL ASSGSAVSSS VVTVTSQCLR SPTSASVSCV SADDLSKEKT SLNKDVAASG DSTTKEVFTT FDFSDVKIPD
201: LRFLAAEEDS MVSNANGAEL DFDCFLTDSN ILLDDYSLLE NDINFSRFEN SLPSELPDCD FTEMEFQLDD FKFAYTDHLT TPPLGLV
101: TKTKKWLGTY ETPAEAEKAY VDKKVEYDAL ASSGSAVSSS VVTVTSQCLR SPTSASVSCV SADDLSKEKT SLNKDVAASG DSTTKEVFTT FDFSDVKIPD
201: LRFLAAEEDS MVSNANGAEL DFDCFLTDSN ILLDDYSLLE NDINFSRFEN SLPSELPDCD FTEMEFQLDD FKFAYTDHLT TPPLGLV
Arabidopsis Description
ERF116Ethylene-responsive transcription factor ERF116 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.