Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007963.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDY09516 | Canola | nucleus | 92.22 | 93.9 |
| CDY49223 | Canola | nucleus | 83.83 | 84.85 |
| CDX68325 | Canola | nucleus | 83.23 | 84.24 |
| AT1G71130.1 | Thale cress | nucleus | 77.25 | 80.12 |
| CDY70837 | Canola | nucleus | 56.29 | 63.95 |
| CDY41468 | Canola | nucleus | 59.28 | 62.66 |
| CDX91694 | Canola | nucleus | 59.88 | 62.11 |
| CDY12500 | Canola | nucleus | 57.48 | 61.94 |
| CDY10965 | Canola | nucleus | 44.91 | 25.34 |
| Zm00001d034605_P001 | Maize | nucleus | 35.33 | 24.79 |
| CDY42030 | Canola | nucleus | 40.12 | 24.54 |
| CDX80006 | Canola | nucleus | 39.52 | 24.54 |
| CDX94215 | Canola | nucleus | 46.11 | 24.52 |
| CDY03521 | Canola | nucleus | 46.71 | 24.22 |
| EER90653 | Sorghum | nucleus | 34.73 | 24.17 |
| CDY47623 | Canola | nucleus | 45.51 | 24.13 |
| Os03t0815800-01 | Rice | nucleus | 34.73 | 24.07 |
| CDY47066 | Canola | nucleus | 46.71 | 22.81 |
| CDY52005 | Canola | nucleus | 38.92 | 22.65 |
| CDY54340 | Canola | nucleus | 45.51 | 22.55 |
| CDY53906 | Canola | nucleus | 38.32 | 22.54 |
| CDX71724 | Canola | nucleus | 37.72 | 21.88 |
| CDX96208 | Canola | nucleus | 45.51 | 21.78 |
| CDY49175 | Canola | nucleus | 45.51 | 21.65 |
| CDY11369 | Canola | nucleus | 36.53 | 21.55 |
| CDY61587 | Canola | nucleus | 46.11 | 21.27 |
| CDX95687 | Canola | nucleus | 32.34 | 21.26 |
| CDY71485 | Canola | nucleus | 42.52 | 21.07 |
| CDY71170 | Canola | nucleus | 42.52 | 21.07 |
| CDY14263 | Canola | nucleus | 41.32 | 21.04 |
| CDX97406 | Canola | nucleus | 41.32 | 21.04 |
| CDX92852 | Canola | nucleus | 40.72 | 20.99 |
| CDY05133 | Canola | nucleus | 34.73 | 20.94 |
| CDY29870 | Canola | nucleus | 40.72 | 20.92 |
| CDX90774 | Canola | nucleus | 34.13 | 20.58 |
| CDX84990 | Canola | nucleus | 29.34 | 19.76 |
| Zm00001d019216_P001 | Maize | nucleus | 26.95 | 17.24 |
| Zm00001d005203_P001 | Maize | nucleus | 28.74 | 16.49 |
| CDY42104 | Canola | nucleus | 17.37 | 16.2 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 30.54 | 16.04 |
| CDY40978 | Canola | nucleus | 23.95 | 15.81 |
| CDY38591 | Canola | nucleus | 28.14 | 15.61 |
| CDY07380 | Canola | nucleus | 29.34 | 15.56 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 31.14 | 15.48 |
| CDX96010 | Canola | nucleus | 28.14 | 15.46 |
| CDY13596 | Canola | nucleus | 29.34 | 15.46 |
| CDY04234 | Canola | nucleus | 29.34 | 15.46 |
| CDY65135 | Canola | nucleus | 28.74 | 15.34 |
| CDX83568 | Canola | nucleus | 28.74 | 15.34 |
| CDY44887 | Canola | nucleus | 28.74 | 15.19 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 31.14 | 14.81 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 31.14 | 14.36 |
| CDX99741 | Canola | nucleus | 26.35 | 13.97 |
| KXG34718 | Sorghum | nucleus | 27.54 | 13.37 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078JHW3 | UniProt:A0A078JHW3 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY66105 | ProteinID:CDY66105 | ProteinID:CDY66105.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00052078001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0002546C2D | SEG:seg | : | : |
Description
BnaA02g35550DBnaA02g35550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JHW3]
Coordinates
chrLK035084:+:382..1215
Molecular Weight (calculated)
18589.0 Da
IEP (calculated)
10.203
GRAVY (calculated)
-0.654
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRIVRISVT DAEATDSSSD EDTEEPCRET TTTAQVRRRR GKRLVKEIVI DPPDSDDNRD ACKTRFKIRI PAEFLKATAE GGKKKFRGVR QRPWGKWAAE
101: IRCGRALKGR RDRLWLGTFD TAEEAALAYD NAAVQLIGPH APTNFSFPAE SQEVKMVAGA SAVARVA
101: IRCGRALKGR RDRLWLGTFD TAEEAALAYD NAAVQLIGPH APTNFSFPAE SQEVKMVAGA SAVARVA
001: MKRIIRISFT DAEATDSSSD EDTEERGGAS QTRRRGKRLV KEIVIDPSDS ADKLDVCKTR FKIRIPAEFL KTAKTEKKYR GVRQRPWGKW VAEIRCGRGA
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
Arabidopsis Description
ERF070Ethylene-responsive transcription factor ERF070 [Source:UniProtKB/Swiss-Prot;Acc:Q9C995]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.