Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96010 | Canola | nucleus | 92.69 | 91.78 |
| Bra004318.1-P | Field mustard | nucleus | 92.36 | 91.45 |
| CDY07380 | Canola | nucleus | 65.78 | 62.86 |
| CDY04234 | Canola | nucleus | 65.78 | 62.46 |
| CDY44887 | Canola | nucleus | 57.14 | 54.43 |
| CDY65135 | Canola | nucleus | 56.48 | 54.31 |
| AT1G68550.2 | Thale cress | nucleus | 55.81 | 51.85 |
| CDX84990 | Canola | nucleus | 37.21 | 45.16 |
| CDY42104 | Canola | nucleus | 26.25 | 44.13 |
| CDX83568 | Canola | nucleus | 40.2 | 38.66 |
| CDY13596 | Canola | nucleus | 38.87 | 36.91 |
| CDY40978 | Canola | nucleus | 30.9 | 36.76 |
| CDX99741 | Canola | nucleus | 34.88 | 33.33 |
| CDY70837 | Canola | nucleus | 15.95 | 32.65 |
| CDY12500 | Canola | nucleus | 15.95 | 30.97 |
| VIT_01s0011g03470.t01 | Wine grape | nucleus | 32.56 | 30.62 |
| KRH45262 | Soybean | nucleus | 35.55 | 29.4 |
| CDY41468 | Canola | nucleus | 15.28 | 29.11 |
| KRH35957 | Soybean | nucleus | 33.89 | 28.73 |
| KRH43430 | Soybean | nucleus | 32.23 | 28.7 |
| CDX91694 | Canola | nucleus | 15.28 | 28.57 |
| CDY66105 | Canola | nucleus | 15.61 | 28.14 |
| CDY09516 | Canola | nucleus | 15.28 | 28.05 |
| CDX68325 | Canola | nucleus | 15.28 | 27.88 |
| CDY49223 | Canola | nucleus | 15.28 | 27.88 |
| Solyc05g009450.1.1 | Tomato | nucleus | 31.56 | 27.86 |
| PGSC0003DMT400037698 | Potato | nucleus | 31.56 | 27.62 |
| KRH75373 | Soybean | nucleus, plastid | 33.89 | 27.49 |
| KRG90812 | Soybean | nucleus | 32.56 | 26.63 |
| Solyc04g007180.1.1 | Tomato | nucleus | 28.9 | 25.97 |
| PGSC0003DMT400041053 | Potato | nucleus | 29.9 | 25.42 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 20.27 | 24.6 |
| KRH04558 | Soybean | nucleus | 30.23 | 24.53 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 21.93 | 24.26 |
| EER98690 | Sorghum | nucleus | 21.59 | 23.05 |
| CDX80006 | Canola | nucleus | 20.6 | 23.05 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 19.27 | 22.83 |
| CDY10965 | Canola | nucleus | 22.26 | 22.64 |
| CDY42030 | Canola | nucleus | 20.27 | 22.34 |
| Os09t0309700-01 | Rice | nucleus | 23.59 | 22.33 |
| HORVU5Hr1G055190.2 | Barley | nucleus | 22.59 | 22.01 |
| TraesCS5D01G185300.1 | Wheat | nucleus | 22.26 | 21.61 |
| CDY11369 | Canola | nucleus | 20.27 | 21.55 |
| TraesCS5B01G178600.1 | Wheat | nucleus | 21.93 | 21.36 |
| CDX94215 | Canola | nucleus | 22.26 | 21.34 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 20.6 | 21.31 |
| TraesCS5A01G180800.1 | Wheat | nucleus | 21.93 | 21.29 |
| CDY52005 | Canola | nucleus | 20.27 | 21.25 |
| CDX71724 | Canola | nucleus | 20.27 | 21.18 |
| CDY53906 | Canola | nucleus | 19.93 | 21.13 |
| CDY54340 | Canola | nucleus | 23.26 | 20.77 |
| CDY47066 | Canola | nucleus | 23.59 | 20.76 |
| CDY47623 | Canola | nucleus | 21.59 | 20.63 |
| CDY03521 | Canola | nucleus | 21.93 | 20.5 |
| CDX95687 | Canola | nucleus | 17.28 | 20.47 |
| OQU89260 | Sorghum | nucleus | 19.27 | 20.14 |
| CDX90774 | Canola | nucleus | 17.94 | 19.49 |
| CDY29870 | Canola | nucleus | 20.93 | 19.38 |
| CDX92852 | Canola | nucleus | 20.6 | 19.14 |
| CDY05133 | Canola | nucleus | 17.61 | 19.13 |
| CDY49175 | Canola | nucleus | 22.26 | 19.09 |
| CDX96208 | Canola | nucleus | 21.93 | 18.91 |
| CDY71170 | Canola | nucleus | 20.93 | 18.69 |
| CDX97406 | Canola | nucleus | 20.27 | 18.6 |
| CDY71485 | Canola | nucleus | 20.6 | 18.4 |
| CDY14263 | Canola | nucleus | 19.93 | 18.29 |
| CDY61587 | Canola | nucleus | 21.93 | 18.23 |
| Zm00001d020043_P001 | Maize | plastid | 22.92 | 17.97 |
| GSMUA_Achr10P... | Banana | vacuole | 23.59 | 12.03 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HLX3 | UniProt:A0A078HLX3 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY38591 | ProteinID:CDY38591 | ProteinID:CDY38591.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00066275001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF21 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EF4A45 | SEG:seg | : | : |
Description
BnaC06g30140DBnaC06g30140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLX3]
Coordinates
chrLK032427:-:145423..146528
Molecular Weight (calculated)
33634.0 Da
IEP (calculated)
4.716
GRAVY (calculated)
-0.650
Length
301 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGIREQLLL SDTKKPKRCN PQEKTQQSLR KVRILVNDPY ATDDSSSDEG ETKTRRIVRV VNFPPLVESA APPRVEPTSV SSSQDSTKTT SKKAAAAGAS
101: RPRLSKKPVG VRQRKWGKWA AEIRHPITKN RTWLGTFETE EAAHQAYKDK RKEYDALLAT SNDSASVSET SQCSRSSPLE QDTSASTPAL KEEIKITTTT
201: AGVDSSSKEV LFGFNFAELP IPDLGFFAEE GQMGDLGFFT EDHDQLNLDC LFTDDQFDDF SMLWFEDSGP SELPDWDFPD VEFESSFFFA DQHIPLKSFV
301: A
101: RPRLSKKPVG VRQRKWGKWA AEIRHPITKN RTWLGTFETE EAAHQAYKDK RKEYDALLAT SNDSASVSET SQCSRSSPLE QDTSASTPAL KEEIKITTTT
201: AGVDSSSKEV LFGFNFAELP IPDLGFFAEE GQMGDLGFFT EDHDQLNLDC LFTDDQFDDF SMLWFEDSGP SELPDWDFPD VEFESSFFFA DQHIPLKSFV
301: A
001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
Arabidopsis Description
ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.