CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025170.1-P	Field mustard	nucleus	97.79	97.48
CDX83568	Canola	nucleus	93.69	94.89
AT3G25890.2	Thale cress	nucleus	79.81	76.2
CDY40978	Canola	nucleus	59.94	75.1
CDX99741	Canola	nucleus	69.4	69.84
CDX84990	Canola	nucleus	34.38	43.95
CDY42104	Canola	nucleus	24.61	43.58
CDX96010	Canola	nucleus	37.85	39.47
CDY38591	Canola	nucleus	36.91	38.87
CDY04234	Canola	nucleus	38.17	38.17
CDY65135	Canola	nucleus	37.54	38.02
CDY07380	Canola	nucleus	37.54	37.78
CDY44887	Canola	nucleus	36.91	37.03
VIT_01s0011g03470.t01	Wine grape	nucleus	32.49	32.19
CDY70837	Canola	nucleus	14.51	31.29
CDY41468	Canola	nucleus	15.46	31.01
Solyc05g009450.1.1	Tomato	nucleus	33.12	30.79
CDX91694	Canola	nucleus	15.46	30.43
CDY12500	Canola	nucleus	14.83	30.32
PGSC0003DMT400037698	Potato	nucleus	32.81	30.23
CDY66105	Canola	nucleus	15.46	29.34
CDY09516	Canola	nucleus	14.83	28.66
CDY49223	Canola	nucleus	14.83	28.48
CDX68325	Canola	nucleus	14.83	28.48
KRH45262	Soybean	nucleus	31.86	27.75
KRH35957	Soybean	nucleus	30.6	27.32
KRH43430	Soybean	nucleus	29.02	27.22
KRH75373	Soybean	nucleus, plastid	31.55	26.95
Solyc04g007180.1.1	Tomato	nucleus	27.44	25.97
PGSC0003DMT400041053	Potato	nucleus	28.71	25.71
KRG90812	Soybean	nucleus	29.65	25.54
GSMUA_Achr4P06840_001	Banana	nucleus	19.87	24.8
GSMUA_Achr4P13800_001	Banana	nucleus	21.14	24.63
GSMUA_Achr9P19330_001	Banana	mitochondrion	18.3	23.39
CDY10965	Canola	nucleus	21.14	22.64
CDX94215	Canola	nucleus	21.77	21.97
CDY47623	Canola	nucleus	21.77	21.9
KRH04558	Soybean	nucleus	25.24	21.56
CDY03521	Canola	nucleus	21.14	20.81
GSMUA_Achr1P23090_001	Banana	nucleus	18.93	20.62
CDY54340	Canola	nucleus	21.77	20.47
CDY47066	Canola	nucleus	22.08	20.47
CDY53906	Canola	nucleus	18.3	20.42
CDY11369	Canola	nucleus	17.98	20.14
CDX71724	Canola	nucleus	18.3	20.14
CDX95687	Canola	nucleus	16.09	20.08
CDY52005	Canola	nucleus	17.98	19.86
CDX96208	Canola	nucleus	21.45	19.48
Os09t0309700-01	Rice	nucleus	19.24	19.18
CDY49175	Canola	nucleus	21.14	19.09
CDX92852	Canola	nucleus	19.24	18.83
CDY61587	Canola	nucleus	21.45	18.78
TraesCS5B01G178600.1	Wheat	nucleus	18.3	18.77
TraesCS5D01G185300.1	Wheat	nucleus	18.3	18.71
TraesCS5A01G180800.1	Wheat	nucleus	18.3	18.71
CDY71485	Canola	nucleus	19.87	18.69
CDY71170	Canola	nucleus	19.87	18.69
CDY42030	Canola	nucleus	16.09	18.68
CDX80006	Canola	nucleus	15.77	18.59
CDX90774	Canola	nucleus	16.09	18.41
CDX97406	Canola	nucleus	18.93	18.29
CDY29870	Canola	nucleus	18.61	18.15
EER98690	Sorghum	nucleus	16.09	18.09
OQU89260	Sorghum	nucleus	16.4	18.06
CDY05133	Canola	nucleus	15.77	18.05
CDY14263	Canola	nucleus	18.61	17.99
HORVU5Hr1G055190.2	Barley	nucleus	17.35	17.8
Zm00001d020043_P001	Maize	plastid	18.3	15.1
GSMUA_Achr10P...	Banana	vacuole	25.55	13.73

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	GO:A0A078FKD8	UniProt:A0A078FKD8	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
EnsemblPlants:CDY13596	ProteinID:CDY13596	ProteinID:CDY13596.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSBRNA2T00078006001	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF21	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI0004EE8D0C	SEG:seg	:	:	:	:

Description

BnaA06g33270DBnaA06g33270D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKD8]

Coordinates

chrLK032037:+:177399..178674

Molecular Weight (calculated)

35067.0 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.541

Length

317 amino acids

Sequence
(BLAST)

001: MAEPKKRSSL HATKPSKKPK KKPFQLNRLP GLSEDLKTMR KIRFVVNDPY ATDYSSGEED VETSRRRKRY VCEIDRPFSP ATAQAESESS YVQESRNNGG
101: SKKALSGKAS QVVGRSSVTK PVGVRQRKWG KWAAEIRHPI TKTRTWLGTY ETLEQAADAY ANKKLEFDAL AAACSAAPCD STASNETVSI ASNVEAVSSI
201: DRDMKVTDSK KPSFDFNFAD LQIPDMGCFI DESLIPNACE LDFFLTEEKD DQLLDDYCGI DDMNIIGLEC DGPSELPDYD FSDVEIDLGL IGTTIDKFAF
301: VDHLATSTTT PLNIACP

Best Arabidopsis Sequence Match ( AT3G25890.2 )
(BLAST)

001: MAERKKRSSI QTNKPNKKPM KKKPFQLNHL PGLSEDLKTM RKLRFVVNDP YATDYSSSEE EERSQRRKRY VCEIDLPFAQ AATQAESESS YCQESNNNGV
101: SKTKISACSK KVLRSKASPV VGRSSTTVSK PVGVRQRKWG KWAAEIRHPI TKVRTWLGTY ETLEQAADAY ATKKLEFDAL AAATSAASSV LSNESGSMIS
201: ASGSSIDLDK KLVDSTLDQQ AGESKKASFD FDFADLQIPE MGCFIDDSFI PNACELDFLL TEENNNQMLD DYCGIDDLDI IGLECDGPSE LPDYDFSDVE
301: IDLGLIGTTI DKYAFVDHIA TTTPTPLNIA CP

Arabidopsis Description

ERF119Ethylene-responsive transcription factor ERF119 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.