Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G185300.1 | Wheat | nucleus | 96.45 | 96.45 |
| TraesCS5B01G178600.1 | Wheat | nucleus | 95.48 | 95.79 |
| HORVU5Hr1G055190.2 | Barley | nucleus | 90.97 | 91.26 |
| EER98690 | Sorghum | nucleus | 46.77 | 51.42 |
| OQU89260 | Sorghum | nucleus | 46.13 | 49.65 |
| Os09t0309700-01 | Rice | nucleus | 50.65 | 49.37 |
| Zm00001d020043_P001 | Maize | plastid | 45.81 | 36.98 |
| KRH39204 | Soybean | nucleus | 13.87 | 25.44 |
| KRH41626 | Soybean | nucleus | 13.23 | 24.85 |
| CDX84990 | Canola | nucleus | 19.68 | 24.6 |
| CDY42104 | Canola | nucleus | 13.87 | 24.02 |
| AT1G25470.1 | Thale cress | nucleus | 21.29 | 23.0 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 18.39 | 22.44 |
| CDY07380 | Canola | nucleus | 22.58 | 22.22 |
| Bra004033.1-P | Field mustard | nucleus | 22.58 | 22.08 |
| CDY38591 | Canola | nucleus | 21.29 | 21.93 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 17.42 | 21.77 |
| CDY04234 | Canola | nucleus | 22.26 | 21.77 |
| TraesCS3A01G238300.1 | Wheat | nucleus | 20.65 | 21.69 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 19.03 | 21.69 |
| KRH48474 | Soybean | nucleus | 21.61 | 21.41 |
| CDX96010 | Canola | nucleus | 20.97 | 21.38 |
| Bra004318.1-P | Field mustard | nucleus | 20.97 | 21.38 |
| Bra033923.1-P | Field mustard | nucleus | 21.61 | 21.2 |
| CDY44887 | Canola | nucleus | 21.61 | 21.2 |
| CDY65135 | Canola | nucleus | 21.29 | 21.09 |
| AT1G68550.2 | Thale cress | nucleus | 21.94 | 20.99 |
| Bra036360.1-P | Field mustard | nucleus | 18.39 | 20.28 |
| KRH43430 | Soybean | nucleus | 21.61 | 19.82 |
| VIT_01s0011g03470.t01 | Wine grape | nucleus | 20.0 | 19.38 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 18.06 | 19.24 |
| CDX83568 | Canola | nucleus | 19.35 | 19.17 |
| CDY40978 | Canola | nucleus | 15.48 | 18.97 |
| KRH45262 | Soybean | nucleus | 22.26 | 18.96 |
| KRH35957 | Soybean | nucleus | 21.61 | 18.87 |
| KRG90812 | Soybean | nucleus | 22.26 | 18.75 |
| KRH75373 | Soybean | nucleus, plastid | 22.26 | 18.6 |
| CDY13596 | Canola | nucleus | 18.71 | 18.3 |
| Bra025170.1-P | Field mustard | nucleus | 18.71 | 18.24 |
| TraesCS7A01G120100.1 | Wheat | nucleus | 18.71 | 18.24 |
| Bra024743.1-P | Field mustard | plastid | 19.35 | 17.96 |
| AT3G25890.2 | Thale cress | nucleus | 18.71 | 17.47 |
| PGSC0003DMT400037698 | Potato | nucleus | 19.35 | 17.44 |
| KRH04558 | Soybean | nucleus | 20.65 | 17.25 |
| CDX99741 | Canola | nucleus | 17.42 | 17.14 |
| Solyc05g009450.1.1 | Tomato | nucleus | 18.71 | 17.01 |
| Solyc04g007180.1.1 | Tomato | nucleus | 18.06 | 16.72 |
| TraesCS3A01G149000.1 | Wheat | nucleus | 18.71 | 16.52 |
| PGSC0003DMT400014358 | Potato | nucleus | 20.65 | 16.45 |
| Solyc03g119580.1.1 | Tomato | nucleus | 20.0 | 16.1 |
| PGSC0003DMT400041053 | Potato | nucleus | 18.39 | 16.1 |
| TraesCS4A01G193100.1 | Wheat | nucleus | 15.16 | 15.21 |
| TraesCS5A01G424600.1 | Wheat | nucleus, plastid | 13.87 | 14.73 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 15.48 | 13.26 |
| GSMUA_Achr10P... | Banana | vacuole | 17.74 | 9.32 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 | PANTHER:PTHR31190:SF7 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS5A01G180800 | EnsemblPlants:TraesCS5A01G180800.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr5A:-:379353913..379354845
Molecular Weight (calculated)
34419.5 Da
IEP (calculated)
4.531
GRAVY (calculated)
-0.552
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIPCSRKVR ISCCDPDATD SSDEDDRHAK KEKRMTMEVL VPMKTSGPLK SRKTLVPCGS KKSIGTEKKQ PTSKYPGVRL RSWGKWAAEI RDPVSKTRKW
101: IGTFTSEEAA AAAYEAERNR VRTEMLAIKS RSPPSEHEAV SSEATVSCVS SSVSFGDQKA QEVHKLASME IDPDTADESL LHCSPEPPGK EIQVDAFVGR
201: MNVDESLVHC SSTPSDEEIP VDAFCSQMNE LPPISDYVCT TDKLSLDDIS RLADMFPVND FVDTTGEPPG DDYIGLADIS HLPMPMFELD TELNWEGFDF
301: ASMERELERL
101: IGTFTSEEAA AAAYEAERNR VRTEMLAIKS RSPPSEHEAV SSEATVSCVS SSVSFGDQKA QEVHKLASME IDPDTADESL LHCSPEPPGK EIQVDAFVGR
201: MNVDESLVHC SSTPSDEEIP VDAFCSQMNE LPPISDYVCT TDKLSLDDIS RLADMFPVND FVDTTGEPPG DDYIGLADIS HLPMPMFELD TELNWEGFDF
301: ASMERELERL
001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
Arabidopsis Description
ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.