Factsheet for Solyc05g009450.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037698	Potato	nucleus	92.08	91.28
Solyc04g007180.1.1	Tomato	nucleus	53.67	54.63
VIT_01s0011g03470.t01	Wine grape	nucleus	42.23	45.0
Bra036360.1-P	Field mustard	nucleus	30.21	36.65
CDY40978	Canola	nucleus	26.98	36.36
KRH35957	Soybean	nucleus	36.66	35.21
CDX84990	Canola	nucleus	25.22	34.68
KRH43430	Soybean	nucleus	34.02	34.32
KRG90812	Soybean	nucleus	36.95	34.24
CDY42104	Canola	nucleus	17.89	34.08
KRH45262	Soybean	nucleus	36.07	33.79
AT1G68550.2	Thale cress	nucleus	31.96	33.64
CDY13596	Canola	nucleus	30.79	33.12
Bra025170.1-P	Field mustard	nucleus	30.79	33.02
CDX83568	Canola	nucleus	30.21	32.91
KRH75373	Soybean	nucleus, plastid	34.9	32.08
CDX96010	Canola	nucleus	28.15	31.58
Bra004318.1-P	Field mustard	nucleus	28.15	31.58
CDY38591	Canola	nucleus	27.86	31.56
CDY65135	Canola	nucleus	28.74	31.31
CDX99741	Canola	nucleus	28.74	31.11
AT3G25890.2	Thale cress	nucleus	30.21	31.02
Bra033923.1-P	Field mustard	nucleus	28.74	31.01
CDY44887	Canola	nucleus	28.45	30.7
CDY04234	Canola	nucleus	28.45	30.6
Bra004033.1-P	Field mustard	nucleus	27.86	29.97
CDY07380	Canola	nucleus	27.57	29.84
KRH04558	Soybean	nucleus	32.26	29.65
GSMUA_Achr9P19330_001	Banana	mitochondrion	20.53	28.23
Solyc01g014720.1.1	Tomato	nucleus	14.37	28.16
AT1G25470.1	Thale cress	nucleus	23.46	27.87
Bra024743.1-P	Field mustard	plastid	25.22	25.75
GSMUA_Achr4P06840_001	Banana	nucleus	19.06	25.59
Solyc06g082590.1.1	Tomato	nucleus	18.18	25.0
GSMUA_Achr4P13800_001	Banana	nucleus	19.35	24.26
GSMUA_Achr1P23090_001	Banana	nucleus	20.23	23.71
Solyc01g095500.2.1	Tomato	nucleus	19.35	22.53
Solyc08g081960.1.1	Tomato	nucleus	21.7	21.83
EER98690	Sorghum	nucleus	17.89	21.63
Solyc01g008880.1.1	Tomato	nucleus	12.61	21.61
Os09t0309700-01	Rice	nucleus	19.65	21.07
Solyc06g051840.1.1	Tomato	nucleus	20.53	20.0
Solyc03g119580.1.1	Tomato	nucleus	21.99	19.48
HORVU5Hr1G055190.2	Barley	nucleus	17.3	19.09
TraesCS5B01G178600.1	Wheat	nucleus	17.3	19.09
TraesCS5A01G180800.1	Wheat	nucleus	17.01	18.71
OQU89260	Sorghum	nucleus	15.54	18.4
TraesCS5D01G185300.1	Wheat	nucleus	16.72	18.39
Solyc03g007460.1.1	Tomato	nucleus	20.53	17.68
Zm00001d020043_P001	Maize	plastid	18.77	16.67
Solyc01g008890.2.1	Tomato	nucleus	13.49	15.18
GSMUA_Achr10P...	Banana	vacuole	23.17	13.39

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K4BXB9
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF61	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:Solyc05g009450.1	EnsemblPlants:Solyc05g009450.1.1	UniParc:UPI0002766A6D	SEG:seg	:

Description

No Description!

Coordinates

chr5:-:3621438..3622463

Molecular Weight (calculated)

38032.9 Da

IEP (calculated)

4.509

GRAVY (calculated)

-0.759

Length

341 amino acids

Sequence
(BLAST)

001: MKMSESRRQS QKSKIREESA RPMRKIRIVC DDPEATDSSD DEGVDVSKPK RFVREIYLPV VSSFTLKKVP ETESSCQDSN NGDKKRAKTP KTPSGPRPSS
101: SKYRGVRQRK WGKWAAEIRD PFKSRRVWLG TYNTAEEASH AYEMKRLEFE AMAKSNSNTD VSEKSSNNEC NNKNHRKVNN AGCVSEEDDS AQSLVSHTSH
201: TSPASVFEMD SLTSGSAAVS EVNNNDKLVV QLVDVDKMGL MEDSLSLADI GARMDFDTEM DMFFAGNDNF DQNLDDFAVN DFEDLPICGL DEQLPAGLPD
301: FDFDFDFDGY NEACAWMDDV AATPLMNGTT TTTPLNIALC P

Best Arabidopsis Sequence Match ( AT1G68550.1 )
(BLAST)

001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS

Arabidopsis Description

ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.