CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98690	Sorghum	nucleus	53.12	54.26
TraesCS5D01G185300.1	Wheat	nucleus	50.0	46.45
TraesCS5B01G178600.1	Wheat	nucleus	49.65	46.28
TraesCS5A01G180800.1	Wheat	nucleus	49.65	46.13
HORVU5Hr1G055190.2	Barley	nucleus	48.61	45.31
Os09t0309700-01	Rice	nucleus	48.61	44.03
CDY42104	Canola	nucleus	15.62	25.14
GSMUA_Achr4P06840_001	Banana	nucleus	21.88	24.8
CDX84990	Canola	nucleus	21.18	24.6
KRH41626	Soybean	nucleus	13.89	24.24
GSMUA_Achr9P19330_001	Banana	mitochondrion	19.1	22.18
KRH39204	Soybean	nucleus	12.85	21.89
GSMUA_Achr4P13800_001	Banana	nucleus	20.14	21.32
CDY07380	Canola	nucleus	22.57	20.63
Bra033923.1-P	Field mustard	nucleus	22.57	20.57
CDY44887	Canola	nucleus	22.57	20.57
CDY04234	Canola	nucleus	22.57	20.5
Bra004033.1-P	Field mustard	nucleus	22.57	20.5
AT1G68550.2	Thale cress	nucleus	22.92	20.37
CDY65135	Canola	nucleus	21.88	20.13
GSMUA_Achr1P23090_001	Banana	nucleus	19.79	19.59
AT1G25470.1	Thale cress	nucleus	19.44	19.51
KRH48474	Soybean	nucleus	21.18	19.49
Bra004318.1-P	Field mustard	nucleus	20.49	19.41
CDX96010	Canola	nucleus	20.49	19.41
CDY38591	Canola	nucleus	20.14	19.27
Bra024743.1-P	Field mustard	plastid	22.22	19.16
KRH43430	Soybean	nucleus	21.88	18.64
Bra036360.1-P	Field mustard	nucleus	18.06	18.51
CDY40978	Canola	nucleus	15.62	17.79
VIT_01s0011g03470.t01	Wine grape	nucleus	19.44	17.5
OQU82736	Sorghum	nucleus	14.58	17.5
KRH75373	Soybean	nucleus, plastid	22.22	17.25
KRH35957	Soybean	nucleus	21.18	17.18
KRG90812	Soybean	nucleus	21.88	17.12
EES03374	Sorghum	nucleus	19.1	16.82
KRH45262	Soybean	nucleus	21.18	16.76
CDY13596	Canola	nucleus	18.06	16.4
CDX83568	Canola	nucleus	17.71	16.29
KRH04558	Soybean	nucleus	20.83	16.17
Bra025170.1-P	Field mustard	nucleus	17.71	16.04
EER89242	Sorghum	nucleus, plastid	18.4	15.87
PGSC0003DMT400037698	Potato	nucleus	18.75	15.7
Solyc05g009450.1.1	Tomato	nucleus	18.4	15.54
KXG33839	Sorghum	nucleus	16.32	15.51
Solyc04g007180.1.1	Tomato	nucleus	17.71	15.22
AT3G25890.2	Thale cress	nucleus	17.36	15.06
PGSC0003DMT400041053	Potato	nucleus	18.06	14.69
CDX99741	Canola	nucleus	15.97	14.6
KXG31528	Sorghum	nucleus	18.75	13.78
Solyc03g119580.1.1	Tomato	nucleus	18.4	13.77
PGSC0003DMT400014358	Potato	nucleus	18.06	13.37
EER90653	Sorghum	nucleus	11.11	13.33
KXG34718	Sorghum	nucleus	11.81	9.88
GSMUA_Achr10P...	Banana	vacuole	18.06	8.81

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:8064688	UniProt:A0A1W0W4E8	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	EnsemblPlants:OQU89260	ProteinID:OQU89260	ProteinID:OQU89260.1	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF7	SMART:SM00380	EnsemblPlantsGene:SORBI_3002G165600	SUPFAM:SSF54171	UniParc:UPI0001A83C73	RefSeq:XP_002462168.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:51633326..51636814

Molecular Weight (calculated)

32845.8 Da

IEP (calculated)

4.575

GRAVY (calculated)

-0.506

Length

288 amino acids

Sequence
(BLAST)

001: MLRYKKVCIF CCDPDATDSS DDEDDQTSKK EKKIIREVLV PLRKYKTLRP LKAIMPCRIK DLKSPERKVP LSRYRGVRLR DSGRWQAEIR NPFTKKRDYS
101: LHDTEEAAAA TYQAKWFQFH AEMLAIKAQE PVSKHAALSS SSLVSCASSS VLCKQSIQEV QQNGGVSMEI SEDELLHHEP MDQSLLNFST PMETSGHVML
201: NWKDELPFSD SVSPTDEPPL DDLTRLEAMF PVSDFIDATY EPLDDEYIGL ADISHLPLQF KGPEFDLDAE LDWSGFDFVS MESELELL

Best Arabidopsis Sequence Match ( AT1G68550.1 )
(BLAST)

001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS

Arabidopsis Description

ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.