CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052365_P001	Maize	nucleus	68.33	75.93
KXG33839	Sorghum	nucleus	38.75	30.69
GSMUA_Achr4P16600_001	Banana	nucleus	30.83	29.96
TraesCS4D01G120200.1	Wheat	nucleus	37.92	29.84
TraesCS4A01G193100.1	Wheat	nucleus	38.33	29.77
GSMUA_Achr7P21980_001	Banana	nucleus	30.0	29.15
TraesCS4B01G122100.1	Wheat	nucleus	38.33	27.88
EER90653	Sorghum	nucleus	27.08	27.08
PGSC0003DMT400078294	Potato	nucleus	27.92	27.02
Solyc06g082590.1.1	Tomato	nucleus	27.5	26.61
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	29.17	25.93
HORVU6Hr1G048930.1	Barley	nucleus	19.58	24.74
KRH30664	Soybean	nucleus	27.92	24.63
KRH72836	Soybean	nucleus	27.5	24.35
VIT_06s0004g08190.t01	Wine grape	nucleus	28.33	23.86
HORVU4Hr1G023110.1	Barley	nucleus	37.92	23.7
KRH17205	Soybean	nucleus	27.5	23.4
EER89242	Sorghum	nucleus, plastid	31.25	22.46
GSMUA_Achr8P01690_001	Banana	nucleus	25.0	21.51
EES03374	Sorghum	nucleus	29.17	21.41
KXG31528	Sorghum	nucleus	33.33	20.41
KXG34718	Sorghum	nucleus	26.25	18.31
KRG98122	Soybean	nucleus	17.5	18.18
EER98690	Sorghum	nucleus	21.25	18.09
OQU89260	Sorghum	nucleus	17.5	14.58

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:8083013	UniProt:A0A1Z5RHA0	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471
InterPro:IPR036955	EnsemblPlants:OQU82736	ProteinID:OQU82736	ProteinID:OQU82736.1	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF73	SMART:SM00380	EnsemblPlantsGene:SORBI_3005G014800	SUPFAM:SSF54171
UniParc:UPI0001A869B6	RefSeq:XP_002450156.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:1333156..1334273

Molecular Weight (calculated)

26064.3 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.721

Length

240 amino acids

Sequence
(BLAST)

001: MDPLHPRDLA MDDTRQHQHL RPRHAAGGRM VRVRFADSEA TDSDSSDECH RQRHRLLHQI GQPLPSSPAP APQRNRLSRT GDRPFRGVRR RPWGKYAAEI
101: RDPGLAGKRR WLGTFDTAEE AAAVYDAAAL RIRGRRAVTN FPSSPAAVAP APAPALAAPR SNPSPAPEAE TSSASTVVDA GTGGDDEVTG VPPTPPWFGE
201: GGPLELLDFG LPPAATKRGQ WEEEEFGDLG DLDHLFDLPF

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.