Factsheet for Zm00001d052365_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU82736	Sorghum	nucleus	75.93	68.33
GSMUA_Achr4P16600_001	Banana	nucleus	32.41	28.34
TraesCS4D01G120200.1	Wheat	nucleus	39.81	28.2
TraesCS4A01G193100.1	Wheat	nucleus	40.28	28.16
Zm00001d042588_P001	Maize	nucleus	37.04	26.76
TraesCS4B01G122100.1	Wheat	nucleus	40.74	26.67
GSMUA_Achr7P21980_001	Banana	nucleus	30.09	26.32
Zm00001d034605_P001	Maize	nucleus	28.7	26.05
HORVU6Hr1G048930.1	Barley	nucleus	22.69	25.79
PGSC0003DMT400078294	Potato	nucleus	29.17	25.4
Solyc06g082590.1.1	Tomato	nucleus	28.7	25.0
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	29.17	23.33
KRH72836	Soybean	nucleus	29.17	23.25
KRH30664	Soybean	nucleus	28.7	22.79
HORVU4Hr1G023110.1	Barley	nucleus	39.35	22.14
Zm00001d044004_P001	Maize	nucleus	30.56	22.07
Zm00001d036251_P001	Maize	nucleus	31.48	21.59
Zm00001d045262_P001	Maize	nucleus	31.48	21.59
VIT_06s0004g08190.t01	Wine grape	nucleus	27.78	21.05
GSMUA_Achr8P01690_001	Banana	nucleus	26.85	20.79
Zm00001d005203_P001	Maize	nucleus	27.78	20.62
KRH17205	Soybean	nucleus	26.85	20.57
Zm00001d011499_P001	Maize	nucleus	28.7	20.46
Zm00001d008968_P001	Maize	nucleus	30.56	20.31
Zm00001d019216_P001	Maize	nucleus	24.07	19.92
Zm00001d039324_P001	Maize	nucleus	31.94	19.49
KRG98122	Soybean	nucleus	18.52	17.32
Zm00001d020043_P001	Maize	plastid	24.54	13.8

Protein Annotations

EntrezGene:103655773	Gene3D:3.30.730.10	MapMan:35.2	UniProt:A0A1D6QGN8	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf
ProteinID:AQK57059.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190
PANTHER:PTHR31190:SF73	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0004DE9708	EnsemblPlantsGene:Zm00001d052365	EnsemblPlants:Zm00001d052365_P001
EnsemblPlants:Zm00001d052365_T001	SEG:seg	:	:	:	:

Description

AP2-EREBP-transcription factor 155Putative AP2/EREBP transcription factor superfamily protein

Coordinates

chr4:-:188309258..188309908

Molecular Weight (calculated)

22875.7 Da

IEP (calculated)

6.635

GRAVY (calculated)

-0.556

Length

216 amino acids

Sequence
(BLAST)

001: MDDARQHQPR PPHGAGGRVR LSDSDADECH RHLLHQTGHP LPSSAAAPAP KSNRLAPKSN RPFRGVRRRP WGKYAAEIRD PGIAGKRRWL GTFDTAEEAA
101: AVYDAAALRI RGHRAVTNFP SSPAAVAPKP ALAAAVRPPP PAPPPAPEAE TSSASTVVDA GAGGDDEVSG VPPWFGDGGP LELLDFGLPL AAPKRAQWEE
201: EFGDLGDLDQ IFDLPL

Best Arabidopsis Sequence Match ( AT2G33710.1 )
(BLAST)

001: MHSGKRPLSP ESMAGNREEK KELCCCSTLS ESDVSDFVSE LTGQPIPSSI DDQSSSLTLQ EKSNSRQRNY RGVRQRPWGK WAAEIRDPNK AARVWLGTFD
101: TAEEAALAYD KAAFEFRGHK AKLNFPEHIR VNPTQLYPSP ATSHDRIIVT PPSPPPPIAP DILLDQYGHF QSRSSDSSAN LSMNMLSSSS SSLNHQGLRP
201: NLEDGENVKN ISIHKRRK

Arabidopsis Description

Integrase-type DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IFX1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.