Factsheet for GSMUA_Achr8P01690_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	48.03	49.63
GSMUA_Achr7P21980_001	Banana	nucleus	38.35	43.32
GSMUA_Achr4P16600_001	Banana	nucleus	37.63	42.51
PGSC0003DMT400078294	Potato	nucleus	33.69	37.9
Solyc06g082590.1.1	Tomato	nucleus	33.33	37.5
VIT_06s0004g08190.t01	Wine grape	nucleus	33.69	32.98
KRH72836	Soybean	nucleus	30.47	31.37
GSMUA_Achr9P28840_001	Banana	nucleus	32.62	30.85
GSMUA_Achr2P19950_001	Banana	nucleus	30.11	30.77
KRH17205	Soybean	nucleus	30.11	29.79
KRH30664	Soybean	nucleus	29.03	29.78
GSMUA_Achr7P10720_001	Banana	nucleus	31.9	29.77
GSMUA_Achr6P14240_001	Banana	nucleus	29.75	29.64
GSMUA_Achr7P14200_001	Banana	nucleus	29.75	28.92
GSMUA_Achr10P...	Banana	nucleus	29.75	28.92
GSMUA_Achr10P...	Banana	nucleus	31.54	28.76
GSMUA_Achr6P32030_001	Banana	nucleus	29.39	28.57
GSMUA_Achr9P05260_001	Banana	nucleus	29.75	28.42
GSMUA_Achr10P...	Banana	nucleus	29.39	27.99
GSMUA_Achr8P19850_001	Banana	nucleus	32.26	26.95
Zm00001d052365_P001	Maize	nucleus	20.79	26.85
GSMUA_Achr10P...	Banana	mitochondrion, nucleus	28.67	25.64
Os05t0316800-01	Rice	nucleus	25.81	25.62
GSMUA_Achr9P19330_001	Banana	mitochondrion	22.22	25.0
OQU82736	Sorghum	nucleus	21.51	25.0
Zm00001d042588_P001	Maize	nucleus	26.52	24.75
KXG33839	Sorghum	nucleus	26.52	24.42
TraesCS5B01G426600.1	Wheat	nucleus	25.45	24.15
TraesCS5D01G433100.1	Wheat	nucleus	25.09	23.89
KRG98122	Soybean	nucleus	19.35	23.38
TraesCS5A01G424600.1	Wheat	nucleus, plastid	24.01	22.95
GSMUA_Achr4P06840_001	Banana	nucleus	20.79	22.83
GSMUA_Achr4P13800_001	Banana	nucleus	20.43	20.96
GSMUA_Achr1P23090_001	Banana	nucleus	21.51	20.62
TraesCS4A01G193100.1	Wheat	nucleus	22.22	20.06
TraesCS4D01G120200.1	Wheat	nucleus	21.51	19.67
TraesCS4B01G122100.1	Wheat	nucleus	21.86	18.48
HORVU6Hr1G048930.1	Barley	nucleus	11.11	16.32
HORVU4Hr1G023110.1	Barley	nucleus	22.22	16.15
GSMUA_Achr10P...	Banana	vacuole	22.94	10.85
HORVU0Hr1G013910.2	Barley	cytosol, plastid	6.81	9.09

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF-transcript_factor	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr8G01690_001	EnsemblPlants:GSMUA_Achr8P01690_001
EnsemblPlants:GSMUA_Achr8T01690_001	InterPro:IPR001471	InterPro:IPR036955	UniProt:M0TLS1	PFAM:PF00847	PIRSF:PIRSF038123
PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF18	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI000296CDC1	SEG:seg	:	:	:	:

Description

Putative Pathogenesis-related genes transcriptional activator PTI6 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01690_001]

Coordinates

chr8:+:1314021..1314860

Molecular Weight (calculated)

29916.4 Da

IEP (calculated)

9.153

GRAVY (calculated)

-0.332

Length

279 amino acids

Sequence
(BLAST)

001: MKTVPVAIGR GRKVVRIHCT DADATGSSGD ENEAAMRRVK RHVQEIGFEV AAAKAQVDRR PLAAVSGSCC GKRFRGVRRR PWGRWAAEIR APSRRKRVWL
101: GTFDTAEEAA AAYDAAAIRL RGDNAETIFP AGTAAAAGNR DLSSVGDAAA SDNPFSSPSS VLCNGMDKTP FDVLGHGDVD AFGLSVDPPL HTRELYPPKW
201: PCGDTGDEFA EFAAEDFLLP AAPSSLSNAD TALALSQSKR EHMARVNGKS CYVRVSRVLS PKVVLRTCKP PYCGMRGTI

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.