Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P32030_001 | Banana | nucleus | 72.26 | 73.52 |
| HORVU3Hr1G059250.1 | Barley | nucleus | 46.23 | 45.76 |
| TraesCS3D01G238600.1 | Wheat | nucleus | 45.89 | 45.73 |
| Os01t0657400-00 | Rice | nucleus | 45.55 | 45.55 |
| TraesCS3B01G266800.1 | Wheat | nucleus | 45.55 | 45.39 |
| TraesCS3A01G238300.1 | Wheat | nucleus | 44.86 | 44.41 |
| Zm00001d044004_P001 | Maize | nucleus | 44.52 | 43.48 |
| Zm00001d011499_P001 | Maize | nucleus | 44.86 | 43.23 |
| EES03374 | Sorghum | nucleus | 46.92 | 41.9 |
| GSMUA_Achr2P19950_001 | Banana | nucleus | 38.36 | 41.03 |
| GSMUA_Achr10P... | Banana | nucleus | 40.07 | 40.77 |
| GSMUA_Achr6P14240_001 | Banana | nucleus | 38.7 | 40.36 |
| GSMUA_Achr9P28840_001 | Banana | nucleus | 39.04 | 38.64 |
| GSMUA_Achr10P... | Banana | nucleus | 40.07 | 38.24 |
| GSMUA_Achr8P19850_001 | Banana | nucleus | 42.12 | 36.83 |
| GSMUA_Achr7P14200_001 | Banana | nucleus | 35.96 | 36.59 |
| GSMUA_Achr7P10720_001 | Banana | nucleus | 36.99 | 36.12 |
| GSMUA_Achr10P... | Banana | nucleus | 35.96 | 35.84 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 37.67 | 35.26 |
| GSMUA_Achr4P16600_001 | Banana | nucleus | 28.77 | 34.01 |
| GSMUA_Achr7P21980_001 | Banana | nucleus | 28.08 | 33.2 |
| GSMUA_Achr5P27850_001 | Banana | nucleus, plastid | 30.14 | 32.59 |
| Zm00001d036251_P001 | Maize | nucleus | 33.22 | 30.79 |
| TraesCS7A01G120100.1 | Wheat | nucleus | 32.53 | 29.87 |
| GSMUA_Achr8P01690_001 | Banana | nucleus | 28.42 | 29.75 |
| TraesCS7D01G118000.1 | Wheat | nucleus | 32.88 | 29.63 |
| EER89242 | Sorghum | nucleus, plastid | 33.56 | 29.34 |
| TraesCS7B01G018400.1 | Wheat | nucleus | 32.19 | 29.19 |
| Zm00001d045262_P001 | Maize | nucleus | 30.82 | 28.57 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 22.95 | 26.38 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 21.58 | 25.4 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 20.55 | 22.06 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 19.52 | 19.59 |
| GSMUA_Achr10P... | Banana | vacuole | 24.32 | 12.03 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr9G05260_001 | EnsemblPlants:GSMUA_Achr9P05260_001 | EnsemblPlants:GSMUA_Achr9T05260_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0TXN5 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31190 | PANTHER:PTHR31190:SF37 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00029509EF | SEG:seg |
Description
Putative AP2 domain containing protein, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G05260_001]
Coordinates
chr9:-:3408987..3410010
Molecular Weight (calculated)
31979.9 Da
IEP (calculated)
5.265
GRAVY (calculated)
-0.604
Length
292 amino acids
Sequence
(BLAST)
(BLAST)
001: MTKARTLRIF WTDPDATDSS GDEECGVSGR RVGRLVREIG LEPCHSFGDK QKRPRKKASA ERGKMAPAQT GSTKFRGVRR RPWGKYAAEI RDPWRGVRLW
101: LGTFDTAEEA AMVYDCAARQ LRGPGAATNF STPSSSAIST APARPQVEAM PTVSGGYDSR DESHSLSSPT SVLRGFSSCC AKEGPAGEET KEGSDFNAEF
201: WSPECRVEEF VPFDEAPLYH DPWGFSSWEP RVHEARTTRV GFSASAADTS NEVMLASSSA SGTGFGTVTW QDDDYFHDIG DLFPLEPLPA IF
101: LGTFDTAEEA AMVYDCAARQ LRGPGAATNF STPSSSAIST APARPQVEAM PTVSGGYDSR DESHSLSSPT SVLRGFSSCC AKEGPAGEET KEGSDFNAEF
201: WSPECRVEEF VPFDEAPLYH DPWGFSSWEP RVHEARTTRV GFSASAADTS NEVMLASSSA SGTGFGTVTW QDDDYFHDIG DLFPLEPLPA IF
001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
Arabidopsis Description
CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.