Factsheet for Os01t0657400-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G238300.1	Wheat	nucleus	75.0	74.24
TraesCS3B01G266800.1	Wheat	nucleus	74.32	74.06
TraesCS3D01G238600.1	Wheat	nucleus	73.97	73.72
HORVU3Hr1G059250.1	Barley	nucleus	73.63	72.88
Zm00001d044004_P001	Maize	nucleus	72.6	70.9
Zm00001d011499_P001	Maize	nucleus	71.92	69.31
EES03374	Sorghum	nucleus	77.05	68.81
GSMUA_Achr6P32030_001	Banana	nucleus	46.58	47.39
GSMUA_Achr9P05260_001	Banana	nucleus	45.55	45.55
Os01t0224100-01	Rice	nucleus	37.33	28.68
Os03t0815800-01	Rice	nucleus	22.6	27.39
Os05t0316800-01	Rice	nucleus	23.63	24.56
Os09t0309700-01	Rice	nucleus	22.6	20.75

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EMBL:AY339377	ProteinID:BAF05674.1
ProteinID:BAS73512.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os01g0657400	EnsemblPlants:Os01t0657400-00	PFAM:PF00847	PRINTS:PR00367
PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF37	UniProt:Q7XAD7	SMART:SM00380	SUPFAM:SSF54171
UniParc:UPI00000A16E5	SEG:seg	:	:	:	:

Description

ETHYLENE RESPONSE FACTOR 54Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5). (Os01t0657400-00)

Coordinates

chr1:-:26734068..26735164

Molecular Weight (calculated)

30954.6 Da

IEP (calculated)

4.216

GRAVY (calculated)

-0.441

Length

292 amino acids

Sequence
(BLAST)

001: MSRSRTVRIF WDDPDLTDSS GEDEGCGGRR VGSMVRELPP AQMPVAQAAA AAALPEQCSG GDGDMGRRVV GGGCTVGVGR RRLTKDGGPG APSTKFRGVR
101: RRPWGKFAAE IRDPWRGVRV WLGTFDTAEE AARVYDNAAI QLRGPSATTN FSASTNSAGA QDPVAVGYES GAESSPAVSS PTSVLRKVPS LCSLAEDKDD
201: YEAGPCEPAT AAGSNLTVLE EEELGEFVPF EDAPVYGGSS FWDFEPESGF LYAEPSSPET PWDAGATSSG EAQDYFQDLR DLFPLNPLPA IF

Best Arabidopsis Sequence Match ( AT4G23750.1 )
(BLAST)

001: MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV

Arabidopsis Description

CRF2Ethylene-responsive transcription factor CRF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.