Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os03t0815800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G22985.1 | Os03t0815800-01 | AT1G22985.1 | 21705390 |
| AT1G22985.1 | Os03t0815800-01 | AT1G71130.1 | 21705390 |
| AT1G71130.1 | Os03t0815800-01 | AT1G22985.1 | 21705390 |
| AT1G71130.1 | Os03t0815800-01 | AT1G71130.1 | 21705390 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90653 | Sorghum | nucleus | 56.85 | 57.08 |
| Zm00001d034605_P001 | Maize | nucleus | 56.02 | 56.72 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 54.36 | 41.2 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 56.43 | 40.48 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 57.26 | 39.32 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 57.68 | 38.4 |
| Zm00001d019216_P001 | Maize | nucleus | 41.49 | 38.31 |
| Zm00001d005203_P001 | Maize | nucleus | 44.81 | 37.11 |
| CDY70837 | Canola | nucleus | 21.99 | 36.05 |
| Bra012352.1-P | Field mustard | nucleus | 21.58 | 35.37 |
| CDY09516 | Canola | nucleus | 24.07 | 35.37 |
| CDY49223 | Canola | nucleus | 24.07 | 35.15 |
| Bra003936.1-P | Field mustard | nucleus | 24.07 | 35.15 |
| CDX68325 | Canola | nucleus | 24.07 | 35.15 |
| CDY66105 | Canola | nucleus | 24.07 | 34.73 |
| Bra007963.1-P | Field mustard | nucleus | 24.07 | 34.73 |
| CDY12500 | Canola | nucleus | 21.58 | 33.55 |
| CDY41468 | Canola | nucleus | 21.99 | 33.54 |
| AT1G71130.1 | Thale cress | nucleus | 21.99 | 32.92 |
| CDX91694 | Canola | nucleus | 21.99 | 32.92 |
| Bra016367.1-P | Field mustard | nucleus | 21.58 | 32.91 |
| AT1G22985.1 | Thale cress | nucleus | 21.58 | 32.7 |
| KXG34718 | Sorghum | nucleus | 45.23 | 31.69 |
| Os05t0316800-01 | Rice | nucleus | 31.12 | 26.69 |
| Os01t0657400-00 | Rice | nucleus | 27.39 | 22.6 |
| Os01t0224100-01 | Rice | nucleus | 25.31 | 16.05 |
| Os09t0309700-01 | Rice | nucleus | 18.67 | 14.15 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:4334558 | ProteinID:AAO60030.1 | ProteinID:AAR01751.1 | ProteinID:ABF99541.1 |
| EMBL:AK068252 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ProteinID:BAF13600.1 | ProteinID:BAS87036.1 | InterPro:DNA-bd_dom_sf |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| EnsemblPlantsGene:Os03g0815800 | EnsemblPlants:Os03t0815800-01 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31190 |
| PANTHER:PTHR31190:SF82 | UniProt:Q84TW0 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0000002CB6 | RefSeq:XP_015628091.1 |
| SEG:seg | : | : | : | : | : |
Description
ETHYLENE RESPONSE FACTOR 58Similar to Ethylene-responsive transcription factor 5 (Ethylene-responsive element binding factor 5) (EREBP-5) (AtERF5). (Os03t0815800-01);Hypothetical conserved gene. (Os03t0815800-03)
Coordinates
chr3:-:34192581..34193650
Molecular Weight (calculated)
25488.5 Da
IEP (calculated)
10.838
GRAVY (calculated)
-0.421
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTNPSLHEL AAGAAPRGRV VRILVRDADA TDSSSSEDEA VAVAQPRPRR RGKVGGGGGG GGGVKRRVME AGAGEARPTA RFRGVRQRPW GRFAAEIRDP
101: HLRRRLWLGT FDTAEEAAAA YDAASVRLRG SSAATNFASV RCYSLPPELP KPTISPPEAA VRPITLPIGT AKPTLLPRVK EEGESCGGRV KEEASSCEVQ
201: VLAPEPMWTM ISGKRKKRSG CGTRVRAFHA VSACVEEVGG A
101: HLRRRLWLGT FDTAEEAAAA YDAASVRLRG SSAATNFASV RCYSLPPELP KPTISPPEAA VRPITLPIGT AKPTLLPRVK EEGESCGGRV KEEASSCEVQ
201: VLAPEPMWTM ISGKRKKRSG CGTRVRAFHA VSACVEEVGG A
001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
Arabidopsis Description
CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.