Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007963.1-P | Field mustard | nucleus | 93.9 | 92.22 |
| CDY66105 | Canola | nucleus | 93.9 | 92.22 |
| CDX68325 | Canola | nucleus | 84.15 | 83.64 |
| CDY49223 | Canola | nucleus | 84.15 | 83.64 |
| AT1G71130.1 | Thale cress | nucleus | 79.27 | 80.75 |
| CDY70837 | Canola | nucleus | 56.71 | 63.27 |
| CDY41468 | Canola | nucleus | 59.76 | 62.03 |
| CDX91694 | Canola | nucleus | 60.37 | 61.49 |
| CDY12500 | Canola | nucleus | 57.93 | 61.29 |
| CDY10965 | Canola | nucleus | 45.12 | 25.0 |
| Zm00001d034605_P001 | Maize | nucleus | 35.98 | 24.79 |
| CDY47623 | Canola | nucleus | 46.95 | 24.44 |
| CDY03521 | Canola | nucleus | 47.56 | 24.22 |
| CDX94215 | Canola | nucleus | 46.34 | 24.2 |
| CDY42030 | Canola | nucleus | 40.24 | 24.18 |
| EER90653 | Sorghum | nucleus | 35.37 | 24.17 |
| CDX80006 | Canola | nucleus | 39.63 | 24.16 |
| Os03t0815800-01 | Rice | nucleus | 35.37 | 24.07 |
| CDY47066 | Canola | nucleus | 46.95 | 22.51 |
| CDY52005 | Canola | nucleus | 39.02 | 22.3 |
| CDY54340 | Canola | nucleus | 45.73 | 22.26 |
| CDY53906 | Canola | nucleus | 38.41 | 22.18 |
| CDY11369 | Canola | nucleus | 37.2 | 21.55 |
| CDX71724 | Canola | nucleus | 37.2 | 21.18 |
| CDY71485 | Canola | nucleus | 43.29 | 21.07 |
| CDY71170 | Canola | nucleus | 43.29 | 21.07 |
| CDY14263 | Canola | nucleus | 42.07 | 21.04 |
| CDX97406 | Canola | nucleus | 42.07 | 21.04 |
| CDX92852 | Canola | nucleus | 41.46 | 20.99 |
| CDY29870 | Canola | nucleus | 41.46 | 20.92 |
| CDX96208 | Canola | nucleus | 44.51 | 20.92 |
| CDX95687 | Canola | nucleus | 32.32 | 20.87 |
| CDY49175 | Canola | nucleus | 44.51 | 20.8 |
| CDY05133 | Canola | nucleus | 34.76 | 20.58 |
| CDY61587 | Canola | nucleus | 45.12 | 20.44 |
| CDX90774 | Canola | nucleus | 34.15 | 20.22 |
| CDX84990 | Canola | nucleus | 29.27 | 19.35 |
| Zm00001d019216_P001 | Maize | nucleus | 27.44 | 17.24 |
| Zm00001d005203_P001 | Maize | nucleus | 29.27 | 16.49 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 31.1 | 16.04 |
| CDY42104 | Canola | nucleus | 17.07 | 15.64 |
| CDY07380 | Canola | nucleus | 29.88 | 15.56 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 31.71 | 15.48 |
| CDY04234 | Canola | nucleus | 29.88 | 15.46 |
| CDY65135 | Canola | nucleus | 29.27 | 15.34 |
| CDY38591 | Canola | nucleus | 28.05 | 15.28 |
| CDY44887 | Canola | nucleus | 29.27 | 15.19 |
| CDX96010 | Canola | nucleus | 28.05 | 15.13 |
| CDY13596 | Canola | nucleus | 28.66 | 14.83 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 31.71 | 14.81 |
| CDX83568 | Canola | nucleus | 28.05 | 14.7 |
| CDY40978 | Canola | nucleus | 22.56 | 14.62 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 31.71 | 14.36 |
| CDX99741 | Canola | nucleus | 26.83 | 13.97 |
| KXG34718 | Sorghum | nucleus | 28.05 | 13.37 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078F877 | UniProt:A0A078F877 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY09516 | ProteinID:CDY09516 | ProteinID:CDY09516.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00031091001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EEF7B4 | SEG:seg | : | : |
Description
BnaC02g20580DBnaC02g20580D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F877]
Coordinates
chrLK031996:+:930741..931569
Molecular Weight (calculated)
18211.7 Da
IEP (calculated)
9.974
GRAVY (calculated)
-0.597
Length
164 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRIVRISVT DAEATDSSSD EETEEPCGET TRTQVRRRGK RLVKEIVIDP SDSEDKRGAC KTRFKIRIPA EFLKATTEGK KKFRGVRQRP WGKWAAEISC
101: GRALKGRRDR LWLGTFDTAE EAALAYDNAA VQLIGPHAPT NFSFPAECQE VKMVAGASAV ARVA
101: GRALKGRRDR LWLGTFDTAE EAALAYDNAA VQLIGPHAPT NFSFPAECQE VKMVAGASAV ARVA
001: MKRIIRISFT DAEATDSSSD EDTEERGGAS QTRRRGKRLV KEIVIDPSDS ADKLDVCKTR FKIRIPAEFL KTAKTEKKYR GVRQRPWGKW VAEIRCGRGA
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
101: CKGRRDRLWL GTFNTAEEAA LAYDNASIKL IGPHAPTNFG LPAENQEDKT VIGASEVARG A
Arabidopsis Description
ERF070Ethylene-responsive transcription factor ERF070 [Source:UniProtKB/Swiss-Prot;Acc:Q9C995]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.