Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004033.1-P | Field mustard | nucleus | 94.32 | 94.32 |
| CDY07380 | Canola | nucleus | 92.74 | 93.33 |
| CDX96010 | Canola | nucleus | 63.09 | 65.79 |
| CDY38591 | Canola | nucleus | 62.46 | 65.78 |
| CDY65135 | Canola | nucleus | 61.83 | 62.62 |
| AT1G68550.2 | Thale cress | nucleus | 63.41 | 62.04 |
| CDY44887 | Canola | nucleus | 61.51 | 61.71 |
| CDX84990 | Canola | nucleus | 35.65 | 45.56 |
| CDY42104 | Canola | nucleus | 24.29 | 43.02 |
| CDY40978 | Canola | nucleus | 31.23 | 39.13 |
| CDX83568 | Canola | nucleus | 38.17 | 38.66 |
| CDY13596 | Canola | nucleus | 38.17 | 38.17 |
| CDX99741 | Canola | nucleus | 33.44 | 33.65 |
| VIT_01s0011g03470.t01 | Wine grape | nucleus | 33.75 | 33.44 |
| KRH35957 | Soybean | nucleus | 35.96 | 32.11 |
| CDY70837 | Canola | nucleus | 14.83 | 31.97 |
| KRH43430 | Soybean | nucleus | 34.07 | 31.95 |
| KRG90812 | Soybean | nucleus | 35.96 | 30.98 |
| CDY12500 | Canola | nucleus | 14.83 | 30.32 |
| CDY09516 | Canola | nucleus | 15.46 | 29.88 |
| CDX68325 | Canola | nucleus | 15.46 | 29.7 |
| CDY49223 | Canola | nucleus | 15.46 | 29.7 |
| CDY66105 | Canola | nucleus | 15.46 | 29.34 |
| CDY41468 | Canola | nucleus | 14.51 | 29.11 |
| KRH45262 | Soybean | nucleus | 32.81 | 28.57 |
| CDX91694 | Canola | nucleus | 14.51 | 28.57 |
| Solyc05g009450.1.1 | Tomato | nucleus | 30.6 | 28.45 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 22.08 | 28.23 |
| PGSC0003DMT400037698 | Potato | nucleus | 30.6 | 28.2 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 22.4 | 27.95 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 23.66 | 27.57 |
| KRH75373 | Soybean | nucleus, plastid | 32.18 | 27.49 |
| KRH04558 | Soybean | nucleus | 32.18 | 27.49 |
| Solyc04g007180.1.1 | Tomato | nucleus | 27.44 | 25.97 |
| PGSC0003DMT400041053 | Potato | nucleus | 28.08 | 25.14 |
| CDY10965 | Canola | nucleus | 22.71 | 24.32 |
| EER98690 | Sorghum | nucleus | 21.45 | 24.11 |
| CDY53906 | Canola | nucleus | 21.14 | 23.59 |
| CDY52005 | Canola | nucleus | 21.14 | 23.34 |
| HORVU5Hr1G055190.2 | Barley | nucleus | 22.4 | 22.98 |
| CDX94215 | Canola | nucleus | 22.71 | 22.93 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 20.82 | 22.68 |
| CDX80006 | Canola | nucleus | 19.24 | 22.68 |
| CDY11369 | Canola | nucleus | 20.19 | 22.61 |
| OQU89260 | Sorghum | nucleus | 20.5 | 22.57 |
| CDY47623 | Canola | nucleus | 22.4 | 22.54 |
| CDY03521 | Canola | nucleus | 22.71 | 22.36 |
| CDY42030 | Canola | nucleus | 19.24 | 22.34 |
| TraesCS5B01G178600.1 | Wheat | nucleus | 21.77 | 22.33 |
| TraesCS5A01G180800.1 | Wheat | nucleus | 21.77 | 22.26 |
| TraesCS5D01G185300.1 | Wheat | nucleus | 21.77 | 22.26 |
| CDX71724 | Canola | nucleus | 20.19 | 22.22 |
| Os09t0309700-01 | Rice | nucleus | 22.08 | 22.01 |
| CDY05133 | Canola | nucleus | 18.93 | 21.66 |
| CDX90774 | Canola | nucleus | 18.93 | 21.66 |
| CDX95687 | Canola | nucleus | 16.72 | 20.87 |
| CDY54340 | Canola | nucleus | 21.77 | 20.47 |
| CDY47066 | Canola | nucleus | 22.08 | 20.47 |
| CDX92852 | Canola | nucleus | 20.5 | 20.06 |
| CDY29870 | Canola | nucleus | 20.5 | 20.0 |
| CDY14263 | Canola | nucleus | 20.19 | 19.51 |
| CDX97406 | Canola | nucleus | 20.19 | 19.51 |
| CDY71170 | Canola | nucleus | 20.5 | 19.29 |
| CDY71485 | Canola | nucleus | 20.19 | 18.99 |
| CDY49175 | Canola | nucleus | 20.82 | 18.8 |
| CDY61587 | Canola | nucleus | 21.45 | 18.78 |
| CDX96208 | Canola | nucleus | 20.5 | 18.62 |
| Zm00001d020043_P001 | Maize | plastid | 22.08 | 18.23 |
| GSMUA_Achr10P... | Banana | vacuole | 23.34 | 12.54 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078EUH4 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY04234 |
| ProteinID:CDY04234 | ProteinID:CDY04234.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00117961001 | InterPro:IPR001471 | InterPro:IPR036955 | PFAM:PF00847 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF21 | SMART:SM00380 | SUPFAM:SSF54171 |
| UniParc:UPI0004EC4F9F | SEG:seg | : | : | : | : |
Description
BnaC06g25810D
Coordinates
chrLK031950:-:419943..420896
Molecular Weight (calculated)
35231.9 Da
IEP (calculated)
4.530
GRAVY (calculated)
-0.591
Length
317 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEISKQQSL VDMKKPKRSN SLLSSSSHPQ DTHQQPLRKV RIIVNDPYAT DDSSSDEEEV VKQPRQVKRI VREVNFPPLE PPRVEPSVSS SQDSTKTTSK
101: KVVSASASAS PALRPKKRVG VRQRKWGKWA AEIRHPITKI RTWLGTFDTE EAAYQAYIEK RREYDALVGI TNDSVSETSQ CSRSSPLEQD TSASALTCVK
201: PNEEEEIKIT ATDVVPSKEV LFDFNFADLP IPDFGFFEEP MAGGVNEEDL DFDCFFTDDQ LDDFGLLDDI NGFGDCGPSA LPDFDFADLG LDLAGSSFLG
301: DQNAPQHITC TRKSFAT
101: KVVSASASAS PALRPKKRVG VRQRKWGKWA AEIRHPITKI RTWLGTFDTE EAAYQAYIEK RREYDALVGI TNDSVSETSQ CSRSSPLEQD TSASALTCVK
201: PNEEEEIKIT ATDVVPSKEV LFDFNFADLP IPDFGFFEEP MAGGVNEEDL DFDCFFTDDQ LDDFGLLDDI NGFGDCGPSA LPDFDFADLG LDLAGSSFLG
301: DQNAPQHITC TRKSFAT
001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS
Arabidopsis Description
ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.