Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016367.1-P | Field mustard | nucleus | 95.57 | 95.57 |
| CDX91694 | Canola | nucleus | 95.57 | 93.79 |
| CDY70837 | Canola | nucleus | 72.78 | 78.23 |
| CDY12500 | Canola | nucleus | 75.95 | 77.42 |
| AT1G22985.1 | Thale cress | nucleus | 65.82 | 65.41 |
| CDY09516 | Canola | nucleus | 62.03 | 59.76 |
| CDY66105 | Canola | nucleus | 62.66 | 59.28 |
| CDY49223 | Canola | nucleus | 60.76 | 58.18 |
| CDX68325 | Canola | nucleus | 60.76 | 58.18 |
| CDY10965 | Canola | nucleus | 47.47 | 25.34 |
| CDY47623 | Canola | nucleus | 49.37 | 24.76 |
| CDY03521 | Canola | nucleus | 50.0 | 24.53 |
| CDX94215 | Canola | nucleus | 48.73 | 24.52 |
| CDX80006 | Canola | nucleus | 37.97 | 22.3 |
| Os03t0815800-01 | Rice | nucleus | 33.54 | 21.99 |
| CDY54340 | Canola | nucleus | 46.84 | 21.96 |
| CDY47066 | Canola | nucleus | 47.47 | 21.93 |
| Zm00001d034605_P001 | Maize | nucleus | 32.91 | 21.85 |
| CDY53906 | Canola | nucleus | 39.24 | 21.83 |
| CDX96208 | Canola | nucleus | 48.1 | 21.78 |
| CDY42030 | Canola | nucleus | 37.34 | 21.61 |
| CDY52005 | Canola | nucleus | 39.24 | 21.6 |
| CDY49175 | Canola | nucleus | 47.47 | 21.37 |
| EER90653 | Sorghum | nucleus | 32.28 | 21.25 |
| CDY11369 | Canola | nucleus | 37.97 | 21.2 |
| CDX71724 | Canola | nucleus | 38.61 | 21.18 |
| CDX95687 | Canola | nucleus | 32.91 | 20.47 |
| CDY61587 | Canola | nucleus | 46.84 | 20.44 |
| CDX92852 | Canola | nucleus | 41.77 | 20.37 |
| CDY29870 | Canola | nucleus | 41.77 | 20.31 |
| CDY71170 | Canola | nucleus | 43.04 | 20.18 |
| CDY71485 | Canola | nucleus | 42.41 | 19.88 |
| CDY14263 | Canola | nucleus | 40.51 | 19.51 |
| CDX97406 | Canola | nucleus | 40.51 | 19.51 |
| CDY05133 | Canola | nucleus | 33.54 | 19.13 |
| CDX90774 | Canola | nucleus | 33.54 | 19.13 |
| CDX84990 | Canola | nucleus | 29.75 | 18.95 |
| Zm00001d019216_P001 | Maize | nucleus | 27.85 | 16.86 |
| CDY42104 | Canola | nucleus | 18.35 | 16.2 |
| CDY65135 | Canola | nucleus | 31.65 | 15.97 |
| CDY44887 | Canola | nucleus | 31.65 | 15.82 |
| CDX83568 | Canola | nucleus | 31.01 | 15.65 |
| Zm00001d005203_P001 | Maize | nucleus | 28.48 | 15.46 |
| CDY13596 | Canola | nucleus | 31.01 | 15.46 |
| CDY38591 | Canola | nucleus | 29.11 | 15.28 |
| CDX96010 | Canola | nucleus | 29.11 | 15.13 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 29.75 | 14.78 |
| CDY40978 | Canola | nucleus | 23.42 | 14.62 |
| CDY07380 | Canola | nucleus | 29.11 | 14.6 |
| CDY04234 | Canola | nucleus | 29.11 | 14.51 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 30.38 | 14.29 |
| CDX99741 | Canola | nucleus | 27.85 | 13.97 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 30.38 | 13.68 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 30.38 | 13.26 |
| KXG34718 | Sorghum | nucleus | 27.85 | 12.79 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078HXI8 | UniProt:A0A078HXI8 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY41468 | ProteinID:CDY41468 | ProteinID:CDY41468.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00073071001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EE180E | SEG:seg | : | : |
Description
BnaA08g20700DBnaA08g20700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HXI8]
Coordinates
chrLK032498:+:140060..141094
Molecular Weight (calculated)
17406.5 Da
IEP (calculated)
10.627
GRAVY (calculated)
-0.880
Length
158 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRIVRISFT DAEATDSSSS EDDEQTNTES PPPPRRRGKR CVNEIVIDPT DSSGKKNRDR GGKTRFKIRI PARLEKKNKK FRGVRQRPWG KWAAEIRCGK
101: ARDGRPVRVW LGTFETAEEA ALAYDKAAVQ LIGPDAVTNF GCSKAAKEGS DAGTSAVA
101: ARDGRPVRVW LGTFETAEEA ALAYDKAAVQ LIGPDAVTNF GCSKAAKEGS DAGTSAVA
001: MKRIVRISFT DMEATDSSSS EDESPPSSRR RGKKLVKEIV IDHSDPPEVG KTRFKIRIPA SLLAARNTTA NKKKFRGVRQ RPWGKWAAEI RCGRVKGRPE
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
Arabidopsis Description
ERF069CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.