Factsheet for Zm00001d034605_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 3
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005203_P001
Zm00001d019216_P001
Zm00001d034605_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G22985.1	Zm00001d005203_P001	AT1G22985.1	21705390
AT1G22985.1	Zm00001d019216_P001	AT1G22985.1	21705390
AT1G22985.1	Zm00001d034605_P001	AT1G22985.1	21705390
AT1G22985.1	Zm00001d005203_P001	AT1G71130.1	21705390
AT1G22985.1	Zm00001d019216_P001	AT1G71130.1	21705390
AT1G22985.1	Zm00001d034605_P001	AT1G71130.1	21705390
AT1G71130.1	Zm00001d005203_P001	AT1G22985.1	21705390
AT1G71130.1	Zm00001d019216_P001	AT1G22985.1	21705390
AT1G71130.1	Zm00001d034605_P001	AT1G22985.1	21705390
AT1G71130.1	Zm00001d005203_P001	AT1G71130.1	21705390
AT1G71130.1	Zm00001d019216_P001	AT1G71130.1	21705390
AT1G71130.1	Zm00001d034605_P001	AT1G71130.1	21705390

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90653	Sorghum	nucleus	84.03	83.33
Os03t0815800-01	Rice	nucleus	56.72	56.02
TraesCS5D01G481700.1	Wheat	nucleus	51.26	38.36
Zm00001d019216_P001	Maize	nucleus	40.76	37.16
HORVU5Hr1G111550.1	Barley	nucleus	52.1	36.9
CDY70837	Canola	nucleus	22.69	36.73
Bra012352.1-P	Field mustard	nucleus	22.27	36.05
CDY09516	Canola	nucleus	24.79	35.98
TraesCS5A01G468800.1	Wheat	nucleus	54.62	35.91
TraesCS5B01G481300.1	Wheat	nucleus	52.94	35.9
CDY49223	Canola	nucleus	24.79	35.76
CDX68325	Canola	nucleus	24.79	35.76
Bra003936.1-P	Field mustard	nucleus	24.79	35.76
CDY66105	Canola	nucleus	24.79	35.33
Bra007963.1-P	Field mustard	nucleus	24.79	35.33
Zm00001d005203_P001	Maize	nucleus	42.02	34.36
CDY12500	Canola	nucleus	22.27	34.19
AT1G71130.1	Thale cress	nucleus	23.11	34.16
AT1G22985.1	Thale cress	nucleus	22.27	33.33
CDY41468	Canola	nucleus	21.85	32.91
CDX91694	Canola	nucleus	21.85	32.3
Bra016367.1-P	Field mustard	nucleus	21.43	32.28
Zm00001d052365_P001	Maize	nucleus	26.05	28.7
Zm00001d042588_P001	Maize	nucleus	29.41	23.41
Zm00001d044004_P001	Maize	nucleus	28.99	23.08
Zm00001d036251_P001	Maize	nucleus	28.99	21.9
Zm00001d011499_P001	Maize	nucleus	27.31	21.45
Zm00001d045262_P001	Maize	nucleus	26.47	20.0
Zm00001d008968_P001	Maize	nucleus	25.63	18.77
Zm00001d039324_P001	Maize	nucleus	26.47	17.8
Zm00001d020043_P001	Maize	plastid	20.17	12.5

Protein Annotations

EntrezGene:100282192	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EMBL:BT060929
UniProt:C0HF23	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	ProteinID:ONM10752.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF82	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000194899F	EnsemblPlantsGene:Zm00001d034605
EnsemblPlants:Zm00001d034605_P001	EnsemblPlants:Zm00001d034605_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 159Ethylene-responsive transcription factor ERF118

Coordinates

chr1:-:297620879..297621595

Molecular Weight (calculated)

25625.7 Da

IEP (calculated)

11.430

GRAVY (calculated)

-0.411

Length

238 amino acids

Sequence
(BLAST)

001: MGTNPHLQEL AASAVAASEP PPRARVVRIL VHDADATDSS SSEDEAPPLL PRRRSRGGSS SLSVRRRVME PAGASSAVRF RGVRRRPWGR WAAEIREPHN
101: RRRLWLGTFD TAEEAANAYD AANIRFRGVS ATTNFPAARY SPPPKPAKPI ISLTPEPGKV ITLPPVPVKP TFPVQVKEVG GSWGGLVKGA RSEVKAFAPK
201: PVWKMIPRVH QKFPGCADGS GLRAVHAASI YVEEVGGG

Best Arabidopsis Sequence Match ( AT1G03800.1 )
(BLAST)

001: MTTEKENVTT AVAVKDGGEK SKEVSDKGVK KRKNVTKALA VNDGGEKSKE VRYRGVRRRP WGRYAAEIRD PVKKKRVWLG SFNTGEEAAR AYDSAAIRFR
101: GSKATTNFPL IGYYGISSAT PVNNNLSETV SDGNANLPLV GDDGNALASP VNNTLSETAR DGTLPSDCHD MLSPGVAEAV AGFFLDLPEV IALKEELDRV
201: CPDQFESIDM GLTIGPQTAV EEPETSSAVD CKLRMEPDLD LNASP

Arabidopsis Description

ERF10At1g03800 [Source:UniProtKB/TrEMBL;Acc:Q08A59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.