Factsheet for Zm00001d011499_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044004_P001	Maize	nucleus	83.5	84.62
EES03374	Sorghum	nucleus	86.14	79.82
TraesCS3B01G266800.1	Wheat	nucleus	70.63	73.04
TraesCS3D01G238600.1	Wheat	nucleus	69.97	72.35
Os01t0657400-00	Rice	nucleus	69.31	71.92
TraesCS3A01G238300.1	Wheat	nucleus	69.64	71.53
HORVU3Hr1G059250.1	Barley	nucleus	69.31	71.19
GSMUA_Achr6P32030_001	Banana	nucleus	44.22	46.69
GSMUA_Achr9P05260_001	Banana	nucleus	43.23	44.86
Zm00001d039324_P001	Maize	nucleus	39.6	33.9
Zm00001d008968_P001	Maize	nucleus	34.98	32.62
Zm00001d036251_P001	Maize	nucleus	30.03	28.89
Zm00001d052365_P001	Maize	nucleus	20.46	28.7
Zm00001d034605_P001	Maize	nucleus	21.45	27.31
Zm00001d045262_P001	Maize	nucleus	27.39	26.35
Zm00001d042588_P001	Maize	nucleus	23.76	24.08
Zm00001d019216_P001	Maize	nucleus	18.48	21.46
Zm00001d005203_P001	Maize	nucleus	19.47	20.27
Zm00001d020043_P001	Maize	plastid	20.79	16.41

Protein Annotations

EntrezGene:100193610	MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ProteinID:AQK97064.1
UniProt:B4FFN5	EMBL:BT035923	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF37	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00017B722E	EnsemblPlantsGene:Zm00001d011499
EnsemblPlants:Zm00001d011499_P001	EnsemblPlants:Zm00001d011499_T001	SEG:seg	:	:	:

Description

AP2-EREBP-transcription factor 80Ethylene-responsive transcription factor CRF4

Coordinates

chr8:-:152569157..152570068

Molecular Weight (calculated)

31770.4 Da

IEP (calculated)

4.412

GRAVY (calculated)

-0.426

Length

303 amino acids

Sequence
(BLAST)

001: MSRSRTVRIF WDDPDLTDSS GDDEGCGARR VGRMVRELAP APAPAPAALP VPDQCNPGDG DRGRKAGVAG PGVCSGARRR LAKGAGGAAS TKFRGVRRRP
101: WGKFAAEIRD PWRGVRVWLG TFDTAEEAAR VYDAAAVQLR GANATTNFSA SAATNCGSGS GAGAGQDPAT TPAAGYESGA ESSPTSVLRK VPSLSSLAED
201: DSDAPAAQRR SLAVLEEEEL GEFVPFEDAP VYATSGFWDF EPDAGFLYAE PSSPEASWNA AAAVAEPASS DDAPSWAASP VQENDYFQDL RDLFPLNRLP
301: AIF

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.