Factsheet for TraesCS3A01G238300.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G266800.1	Wheat	nucleus	96.27	96.93
TraesCS3D01G238600.1	Wheat	nucleus	96.27	96.93
HORVU3Hr1G059250.1	Barley	nucleus	93.9	93.9
Os01t0657400-00	Rice	nucleus	74.24	75.0
Zm00001d044004_P001	Maize	nucleus	73.22	72.24
Zm00001d011499_P001	Maize	nucleus	71.53	69.64
EES03374	Sorghum	nucleus	75.93	68.5
GSMUA_Achr6P32030_001	Banana	nucleus	45.76	47.04
GSMUA_Achr9P05260_001	Banana	nucleus	44.41	44.86
TraesCS7A01G120100.1	Wheat	nucleus	33.56	31.13
TraesCS3A01G149000.1	Wheat	nucleus	36.95	31.05
TraesCS5A01G424600.1	Wheat	nucleus, plastid	22.71	22.95
TraesCS4A01G193100.1	Wheat	nucleus	22.37	21.36
TraesCS5A01G180800.1	Wheat	nucleus	21.69	20.65
TraesCS5A01G468800.1	Wheat	nucleus	20.68	16.85

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF37	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:TraesCS3A01G238300	EnsemblPlants:TraesCS3A01G238300.1	TIGR:cd00018	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:445279733..445281297

Molecular Weight (calculated)

31478.8 Da

IEP (calculated)

4.275

GRAVY (calculated)

-0.499

Length

295 amino acids

Sequence
(BLAST)

001: MSRSRTVRIY WDDPDVTDSS SEEEDGCAAR RVGRMVRELP PAPAPLVHAA AAAAAASPEQ CSAGDDDLPR RVGGCTGARK RLAKGGGSAA QSTKFRGVRR
101: RPWGKFAAEI RDPWRGVRVW LGTFDTAEEA ARVYDNAAIQ LRGATATTNF STSTNSEGGQ EDLTAAGYES GAESSQAVSS PTSVLRKVPS MSSLAEDRGD
201: SEACQGDAAA GSSLSVPEEL GEFVPFEDAP VYSSSSFWDF EPQSGFLYAE PSSAEEASWD ASAGGEPWAA PVQENDYFFQ DLRDLFPLNQ LPAIF

Best Arabidopsis Sequence Match ( AT5G53290.1 )
(BLAST)

001: MDEYIDFRPL KYTEHKTSMT KYTKKSSEKL SGGKSLKKVS ICYTDPDATD SSSDEDEEDF LFPRRRVKRF VNEITVEPSC NNVVTGVSMK DRKRLSSSSD
101: ETQSPASSRQ RPNNKVSVSG QIKKFRGVRQ RPWGKWAAEI RDPEQRRRIW LGTFETAEEA AVVYDNAAIR LRGPDALTNF SIPPQEEEEE EEPEPVIEEK
201: PVIMTTPTPT TSSSESTEED LQHLSSPTSV LNHRSEEIQQ VQQPFKSAKP EPGVSNAPWW HTGFNTGLGE SDDSFPLDTP FLDNYFNESP PEMSIFDQPM
301: DQIFCENDDI FNDMLFLGGE TMNIEDELTS SSIKDMGSTF SDFDDSLISD LLVA

Arabidopsis Description

CRF3Ethylene-responsive transcription factor CRF3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK12]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.