Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70837 | Canola | nucleus | 90.32 | 95.24 |
| CDY41468 | Canola | nucleus | 77.42 | 75.95 |
| CDX91694 | Canola | nucleus | 78.71 | 75.78 |
| AT1G22985.1 | Thale cress | nucleus | 70.97 | 69.18 |
| CDX68325 | Canola | nucleus | 61.94 | 58.18 |
| CDY49223 | Canola | nucleus | 61.94 | 58.18 |
| CDY09516 | Canola | nucleus | 61.29 | 57.93 |
| CDY66105 | Canola | nucleus | 61.94 | 57.48 |
| CDY10965 | Canola | nucleus | 47.74 | 25.0 |
| CDX94215 | Canola | nucleus | 49.03 | 24.2 |
| CDY47623 | Canola | nucleus | 48.39 | 23.81 |
| CDY03521 | Canola | nucleus | 49.03 | 23.6 |
| CDX80006 | Canola | nucleus | 38.71 | 22.3 |
| Zm00001d034605_P001 | Maize | nucleus | 34.19 | 22.27 |
| EER90653 | Sorghum | nucleus | 34.19 | 22.08 |
| CDY54340 | Canola | nucleus | 47.1 | 21.66 |
| CDY47066 | Canola | nucleus | 47.74 | 21.64 |
| CDY42030 | Canola | nucleus | 38.06 | 21.61 |
| Os03t0815800-01 | Rice | nucleus | 33.55 | 21.58 |
| CDY53906 | Canola | nucleus | 39.35 | 21.48 |
| CDY52005 | Canola | nucleus | 39.35 | 21.25 |
| CDX96208 | Canola | nucleus | 47.74 | 21.2 |
| CDY49175 | Canola | nucleus | 47.1 | 20.8 |
| CDY11369 | Canola | nucleus | 37.42 | 20.49 |
| CDX71724 | Canola | nucleus | 38.06 | 20.49 |
| CDY61587 | Canola | nucleus | 47.1 | 20.17 |
| CDX92852 | Canola | nucleus | 41.94 | 20.06 |
| CDY29870 | Canola | nucleus | 41.94 | 20.0 |
| CDY71170 | Canola | nucleus | 43.23 | 19.88 |
| CDY71485 | Canola | nucleus | 43.23 | 19.88 |
| CDY05133 | Canola | nucleus | 35.48 | 19.86 |
| CDX90774 | Canola | nucleus | 35.48 | 19.86 |
| CDY14263 | Canola | nucleus | 41.29 | 19.51 |
| CDX97406 | Canola | nucleus | 41.29 | 19.51 |
| CDX95687 | Canola | nucleus | 30.97 | 18.9 |
| CDX84990 | Canola | nucleus | 29.68 | 18.55 |
| CDY65135 | Canola | nucleus | 32.26 | 15.97 |
| CDY38591 | Canola | nucleus | 30.97 | 15.95 |
| CDY44887 | Canola | nucleus | 32.26 | 15.82 |
| CDX96010 | Canola | nucleus | 30.97 | 15.79 |
| Zm00001d019216_P001 | Maize | nucleus | 26.45 | 15.71 |
| CDY42104 | Canola | nucleus | 17.42 | 15.08 |
| CDX83568 | Canola | nucleus | 30.32 | 15.02 |
| CDY07380 | Canola | nucleus | 30.32 | 14.92 |
| CDY13596 | Canola | nucleus | 30.32 | 14.83 |
| CDY04234 | Canola | nucleus | 30.32 | 14.83 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 30.32 | 14.78 |
| CDY40978 | Canola | nucleus | 23.87 | 14.62 |
| Zm00001d005203_P001 | Maize | nucleus | 27.1 | 14.43 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 30.97 | 14.29 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 30.97 | 13.68 |
| CDX99741 | Canola | nucleus | 27.74 | 13.65 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 30.97 | 13.26 |
| KXG34718 | Sorghum | nucleus | 27.1 | 12.21 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078FDP3 | UniProt:A0A078FDP3 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY12500 | ProteinID:CDY12500 | ProteinID:CDY12500.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00061818001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EF3A57 | SEG:seg | : | : |
Description
BnaC07g13400DBnaC07g13400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDP3]
Coordinates
chrLK032023:+:413791..414258
Molecular Weight (calculated)
17106.3 Da
IEP (calculated)
10.632
GRAVY (calculated)
-0.654
Length
155 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRIVRISFT DVEATDSSSS EDDQTNTESP SRRKGKRFVK EIVIDPSDSA EVRKTRFKIR IPARLKKKFR GVRQRPWGKW AAEIRCGKAH GGIRNGGPVS
101: LWLGTFETAE EAALAYDKAA IQLIGPHAPT NFGPESPAVK QDSDAGASAS FFCKK
101: LWLGTFETAE EAALAYDKAA IQLIGPHAPT NFGPESPAVK QDSDAGASAS FFCKK
001: MKRIVRISFT DMEATDSSSS EDESPPSSRR RGKKLVKEIV IDHSDPPEVG KTRFKIRIPA SLLAARNTTA NKKKFRGVRQ RPWGKWAAEI RCGRVKGRPE
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
Arabidopsis Description
ERF069CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.