Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012352.1-P | Field mustard | nucleus | 97.96 | 97.96 |
| CDY12500 | Canola | nucleus | 95.24 | 90.32 |
| CDY41468 | Canola | nucleus | 78.23 | 72.78 |
| CDX91694 | Canola | nucleus | 79.59 | 72.67 |
| AT1G22985.1 | Thale cress | nucleus | 71.43 | 66.04 |
| CDX68325 | Canola | nucleus | 63.95 | 56.97 |
| CDY49223 | Canola | nucleus | 63.95 | 56.97 |
| CDY09516 | Canola | nucleus | 63.27 | 56.71 |
| CDY66105 | Canola | nucleus | 63.95 | 56.29 |
| CDY10965 | Canola | nucleus | 46.94 | 23.31 |
| Zm00001d034605_P001 | Maize | nucleus | 36.73 | 22.69 |
| CDX94215 | Canola | nucleus | 48.3 | 22.61 |
| EER90653 | Sorghum | nucleus | 36.73 | 22.5 |
| CDX80006 | Canola | nucleus | 40.82 | 22.3 |
| CDY47623 | Canola | nucleus | 47.62 | 22.22 |
| CDY03521 | Canola | nucleus | 48.3 | 22.05 |
| Os03t0815800-01 | Rice | nucleus | 36.05 | 21.99 |
| CDY53906 | Canola | nucleus | 42.18 | 21.83 |
| CDY42030 | Canola | nucleus | 40.14 | 21.61 |
| CDY52005 | Canola | nucleus | 42.18 | 21.6 |
| CDY54340 | Canola | nucleus | 48.98 | 21.36 |
| CDY47066 | Canola | nucleus | 49.66 | 21.34 |
| CDX96208 | Canola | nucleus | 48.98 | 20.63 |
| CDY11369 | Canola | nucleus | 39.46 | 20.49 |
| CDX71724 | Canola | nucleus | 40.14 | 20.49 |
| CDY49175 | Canola | nucleus | 48.3 | 20.23 |
| CDX92852 | Canola | nucleus | 43.54 | 19.75 |
| CDY29870 | Canola | nucleus | 43.54 | 19.69 |
| CDY61587 | Canola | nucleus | 48.3 | 19.61 |
| CDX97406 | Canola | nucleus | 43.54 | 19.51 |
| CDY14263 | Canola | nucleus | 43.54 | 19.51 |
| CDX95687 | Canola | nucleus | 33.33 | 19.29 |
| CDY71485 | Canola | nucleus | 44.22 | 19.29 |
| CDY71170 | Canola | nucleus | 44.22 | 19.29 |
| CDX90774 | Canola | nucleus | 35.37 | 18.77 |
| CDY05133 | Canola | nucleus | 35.37 | 18.77 |
| CDX84990 | Canola | nucleus | 30.61 | 18.15 |
| Zm00001d019216_P001 | Maize | nucleus | 28.57 | 16.09 |
| CDY65135 | Canola | nucleus | 34.01 | 15.97 |
| CDY38591 | Canola | nucleus | 32.65 | 15.95 |
| CDY44887 | Canola | nucleus | 34.01 | 15.82 |
| CDX96010 | Canola | nucleus | 32.65 | 15.79 |
| TraesCS5D01G481700.1 | Wheat | nucleus | 33.33 | 15.41 |
| Zm00001d005203_P001 | Maize | nucleus | 29.93 | 15.12 |
| CDY07380 | Canola | nucleus | 31.97 | 14.92 |
| HORVU5Hr1G111550.1 | Barley | nucleus | 34.01 | 14.88 |
| CDY04234 | Canola | nucleus | 31.97 | 14.83 |
| CDX83568 | Canola | nucleus | 31.29 | 14.7 |
| CDY40978 | Canola | nucleus | 25.17 | 14.62 |
| CDY42104 | Canola | nucleus | 17.69 | 14.53 |
| CDY13596 | Canola | nucleus | 31.29 | 14.51 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 34.01 | 14.24 |
| TraesCS5A01G468800.1 | Wheat | nucleus | 34.01 | 13.81 |
| CDX99741 | Canola | nucleus | 29.25 | 13.65 |
| KXG34718 | Sorghum | nucleus | 29.93 | 12.79 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | GO:A0A078JYV7 | UniProt:A0A078JYV7 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | EnsemblPlants:CDY70837 | ProteinID:CDY70837 | ProteinID:CDY70837.1 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00007782001 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF43 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI0004EDE87A | SEG:seg | : | : |
Description
BnaAnng35170DBnaAnng35170D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JYV7]
Coordinates
chrLK043471:+:1517..2022
Molecular Weight (calculated)
16258.3 Da
IEP (calculated)
10.657
GRAVY (calculated)
-0.632
Length
147 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRIVRISFT DVEATDSSSS EDDQTNTESP SPRKGKRFVK EIVIDPSDSA EVRKTRFKIR IPARLTKKFR GVRQRPWGKW AAEIRCGKAH GGIRNGGPVR
101: LWLGTFETAE EAALAYDKAA IRLIGPHAPI NFGPESPAVK QDSVAGD
101: LWLGTFETAE EAALAYDKAA IRLIGPHAPI NFGPESPAVK QDSVAGD
001: MKRIVRISFT DMEATDSSSS EDESPPSSRR RGKKLVKEIV IDHSDPPEVG KTRFKIRIPA SLLAARNTTA NKKKFRGVRQ RPWGKWAAEI RCGRVKGRPE
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
101: RIWLGTFETA EEAALAYDNA AIQLIGPDAP TNFGRPDVDS AVVKKQDSDA SGGASEEVV
Arabidopsis Description
ERF069CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.