Factsheet for Os05t0316800-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33839	Sorghum	nucleus	61.21	56.77
Zm00001d042588_P001	Maize	nucleus	58.01	54.52
TraesCS5B01G426600.1	Wheat	nucleus	56.94	54.42
TraesCS5D01G433100.1	Wheat	nucleus	56.23	53.92
TraesCS5A01G424600.1	Wheat	nucleus, plastid	55.87	53.77
GSMUA_Achr7P21980_001	Banana	nucleus	28.47	32.39
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	30.96	32.22
Os03t0815800-01	Rice	nucleus	26.69	31.12
GSMUA_Achr4P16600_001	Banana	nucleus	27.05	30.77
HORVU0Hr1G013910.2	Barley	cytosol, plastid	22.06	29.67
Solyc06g082590.1.1	Tomato	nucleus	25.98	29.44
PGSC0003DMT400078294	Potato	nucleus	25.62	29.03
VIT_06s0004g08190.t01	Wine grape	nucleus	27.4	27.02
KRH72836	Soybean	nucleus	25.27	26.2
KRH30664	Soybean	nucleus	25.27	26.1
GSMUA_Achr8P01690_001	Banana	nucleus	25.62	25.81
Os01t0224100-01	Rice	nucleus	32.74	24.21
KRH17205	Soybean	nucleus	24.2	24.11
Os01t0657400-00	Rice	nucleus	24.56	23.63
KRG98122	Soybean	nucleus	17.44	21.21
Os09t0309700-01	Rice	nucleus	18.15	16.04

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:4338394	ProteinID:AAV44006.1	EMBL:AK110613	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ProteinID:BAF17090.1	ProteinID:BAS93330.1	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	EnsemblPlantsGene:Os05g0316800	EnsemblPlants:Os05t0316800-01
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31190	PANTHER:PTHR31190:SF36	UniProt:Q5W6X0
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00004548C4	RefSeq:XP_015637513.1	SEG:seg	:

Description

ETHYLENE RESPONSE FACTOR 56Similar to Ethylene-responsive transcription factor 9 (Ethylene-responsive element binding factor 9) (EREBP-9) (AtERF9). (Os05t0316800-01)

Coordinates

chr5:+:14663179..14664384

Molecular Weight (calculated)

30332.4 Da

IEP (calculated)

10.351

GRAVY (calculated)

-0.579

Length

281 amino acids

Sequence
(BLAST)

001: MRPPAMSPAD SLAAGRSRRV GASMPRPKRV RVYFVDADAT DTDSSGDERS RPRVREVIDI DVGAASPAPA PKHPRRLVPT ATAALARRRA GMAASRRFRG
101: VRRRPWGRFS AEIRDPSLQK RLWLGTFDTA EEAAAVYDDA ALRIKGSHAV TNFPSDSDTP SAKAKQMKLH PRRHTTPDKT PSSSTAAAAK ASVPDPTPAP
201: PEEDRANDSS FNPFASPTSV LRYAAADEVT APSFEHLLVE LGDLSAPPPS TKAAEFDWLP WWEGEDFVTA GLTASNAVSV K

Best Arabidopsis Sequence Match ( AT1G03800.1 )
(BLAST)

001: MTTEKENVTT AVAVKDGGEK SKEVSDKGVK KRKNVTKALA VNDGGEKSKE VRYRGVRRRP WGRYAAEIRD PVKKKRVWLG SFNTGEEAAR AYDSAAIRFR
101: GSKATTNFPL IGYYGISSAT PVNNNLSETV SDGNANLPLV GDDGNALASP VNNTLSETAR DGTLPSDCHD MLSPGVAEAV AGFFLDLPEV IALKEELDRV
201: CPDQFESIDM GLTIGPQTAV EEPETSSAVD CKLRMEPDLD LNASP

Arabidopsis Description

ERF10At1g03800 [Source:UniProtKB/TrEMBL;Acc:Q08A59]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.