Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P21980_001 | Banana | nucleus | 48.99 | 48.99 |
| GSMUA_Achr5P27850_001 | Banana | nucleus, plastid | 50.2 | 45.93 |
| GSMUA_Achr8P01690_001 | Banana | nucleus | 42.51 | 37.63 |
| PGSC0003DMT400078294 | Potato | nucleus | 37.25 | 37.1 |
| Solyc06g082590.1.1 | Tomato | nucleus | 36.84 | 36.69 |
| VIT_06s0004g08190.t01 | Wine grape | nucleus | 38.06 | 32.98 |
| Zm00001d052365_P001 | Maize | nucleus | 28.34 | 32.41 |
| GSMUA_Achr6P14240_001 | Banana | nucleus | 36.44 | 32.14 |
| GSMUA_Achr2P19950_001 | Banana | nucleus | 35.22 | 31.87 |
| GSMUA_Achr10P... | Banana | nucleus | 36.44 | 31.36 |
| KRH30664 | Soybean | nucleus | 34.01 | 30.88 |
| OQU82736 | Sorghum | nucleus | 29.96 | 30.83 |
| GSMUA_Achr7P14200_001 | Banana | nucleus | 34.82 | 29.97 |
| KRH72836 | Soybean | nucleus | 32.79 | 29.89 |
| GSMUA_Achr7P10720_001 | Banana | nucleus | 35.63 | 29.43 |
| GSMUA_Achr10P... | Banana | nucleus | 36.44 | 29.41 |
| GSMUA_Achr10P... | Banana | nucleus | 34.82 | 29.35 |
| GSMUA_Achr6P32030_001 | Banana | nucleus | 34.01 | 29.27 |
| GSMUA_Achr9P28840_001 | Banana | nucleus | 34.82 | 29.15 |
| GSMUA_Achr9P05260_001 | Banana | nucleus | 34.01 | 28.77 |
| KRH17205 | Soybean | nucleus | 32.79 | 28.72 |
| GSMUA_Achr10P... | Banana | mitochondrion, nucleus | 35.22 | 27.88 |
| Os05t0316800-01 | Rice | nucleus | 30.77 | 27.05 |
| GSMUA_Achr8P19850_001 | Banana | nucleus | 36.03 | 26.65 |
| Zm00001d042588_P001 | Maize | nucleus | 31.98 | 26.42 |
| TraesCS5D01G433100.1 | Wheat | nucleus | 30.36 | 25.6 |
| TraesCS5B01G426600.1 | Wheat | nucleus | 30.36 | 25.51 |
| KXG33839 | Sorghum | nucleus | 30.77 | 25.08 |
| TraesCS5A01G424600.1 | Wheat | nucleus, plastid | 29.55 | 25.0 |
| KRG98122 | Soybean | nucleus | 22.27 | 23.81 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 24.29 | 23.62 |
| TraesCS4A01G193100.1 | Wheat | nucleus | 28.34 | 22.65 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 22.67 | 22.58 |
| TraesCS4D01G120200.1 | Wheat | nucleus | 27.53 | 22.3 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 24.29 | 22.06 |
| TraesCS4B01G122100.1 | Wheat | nucleus | 27.94 | 20.91 |
| HORVU6Hr1G048930.1 | Barley | nucleus | 15.79 | 20.53 |
| HORVU4Hr1G023110.1 | Barley | nucleus | 29.96 | 19.27 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 21.86 | 18.56 |
| GSMUA_Achr10P... | Banana | vacuole | 24.7 | 10.34 |
| HORVU0Hr1G013910.2 | Barley | cytosol, plastid | 6.48 | 7.66 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSMUA_Achr4G16600_001 | EnsemblPlants:GSMUA_Achr4P16600_001 | EnsemblPlants:GSMUA_Achr4T16600_001 |
| InterPro:IPR001471 | InterPro:IPR036955 | UniProt:M0SPH4 | PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 |
| PANTHER:PTHR31194 | PANTHER:PTHR31194:SF18 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000295CDD6 | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G16600_001]
Coordinates
chr4:+:15104601..15105609
Molecular Weight (calculated)
27404.9 Da
IEP (calculated)
8.748
GRAVY (calculated)
-0.709
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPTNAAGTA VRLSEHVVVI RKTIPASEAA GWRWRDRKRR VVRIRFDDAD ATDSSSGEDA EVRGRRRVRR HVHEVGIEVA PGRQAAPRKR QVKGAVGGER
101: ARRFRGVRRR PWGRWAAEIR DPGQGKRVWL GTFDTAEEAA AVYDTAAVRL RGPKAVTNFS PTYAARAETD GDDGWGKGDG ADTCGESRFS PRSVLCYPEE
201: RSAPFGCLCG GEADALEAPP FCLAEFYSPR RQLWEVEFGE LDADEFS
101: ARRFRGVRRR PWGRWAAEIR DPGQGKRVWL GTFDTAEEAA AVYDTAAVRL RGPKAVTNFS PTYAARAETD GDDGWGKGDG ADTCGESRFS PRSVLCYPEE
201: RSAPFGCLCG GEADALEAPP FCLAEFYSPR RQLWEVEFGE LDADEFS
001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV
Arabidopsis Description
CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.