CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042588_P001	Maize	nucleus	84.49	85.62
Os05t0316800-01	Rice	nucleus	56.77	61.21
TraesCS5B01G426600.1	Wheat	nucleus	50.83	52.38
TraesCS5D01G433100.1	Wheat	nucleus	50.49	52.22
TraesCS5A01G424600.1	Wheat	nucleus, plastid	48.84	50.68
OQU82736	Sorghum	nucleus	30.69	38.75
HORVU0Hr1G013910.2	Barley	cytosol, plastid	22.77	33.01
GSMUA_Achr7P21980_001	Banana	nucleus	26.4	32.39
GSMUA_Achr4P16600_001	Banana	nucleus	25.08	30.77
GSMUA_Achr5P27850_001	Banana	nucleus, plastid	27.06	30.37
Solyc06g082590.1.1	Tomato	nucleus	24.42	29.84
PGSC0003DMT400078294	Potato	nucleus	24.09	29.44
EER90653	Sorghum	nucleus	23.1	29.17
KRH72836	Soybean	nucleus	24.09	26.94
GSMUA_Achr8P01690_001	Banana	nucleus	24.42	26.52
KRH30664	Soybean	nucleus	23.76	26.47
VIT_06s0004g08190.t01	Wine grape	nucleus	24.75	26.32
KRH17205	Soybean	nucleus	23.76	25.53
EER89242	Sorghum	nucleus, plastid	24.75	22.46
KXG31528	Sorghum	nucleus	29.04	22.45
EES03374	Sorghum	nucleus	24.09	22.32
KRG98122	Soybean	nucleus	16.83	22.08
KXG34718	Sorghum	nucleus	23.1	20.35
EER98690	Sorghum	nucleus	17.49	18.79
OQU89260	Sorghum	nucleus	15.51	16.32

Protein Annotations

Gene3D:3.30.730.10	MapMan:35.2	UniProt:A0A1B6Q7E1	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955
EnsemblPlants:KXG33839	ProteinID:KXG33839	ProteinID:KXG33839.1	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31190	PANTHER:PTHR31190:SF36	SMART:SM00380	EnsemblPlantsGene:SORBI_3003G381400	SUPFAM:SSF54171	UniParc:UPI00081AB918
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:69490130..69492156

Molecular Weight (calculated)

32365.0 Da

IEP (calculated)

8.067

GRAVY (calculated)

-0.353

Length

303 amino acids

Sequence
(BLAST)

001: MSSVDSLTSG RSRREGPPLP RPKRVHVYFV DADATDTDDS SGDEDERAKR RVREVIHIDV EAASAPTRAA QALVLPKKRR LPSQAAASAL VRRRASGAGF
101: RRRFPGVRLR PWGKFAAEIR DPRQRKRLWL GTFDTAEEAA AAYDDAALRL KGSHVVTKFP AEAPSSPWSR TRLRPRREKP LETAEGAAEE RQEAVASAPA
201: PAPAAAPASL DPQAEDGTAL ICPFTSPTSV LRFAADEVPA APALPAFEFL YSGLGELCDL GAATAPSKAA AAAEFDCLPW WEGEDFVTAT GLTASAGAAV
301: SVI

Best Arabidopsis Sequence Match ( AT4G27950.1 )
(BLAST)

001: MMMDEFMDLR PVKYTEHKTV IRKYTKKSSM ERKTSVRDSA RLVRVSMTDR DATDSSSDEE EFLFPRRRVK RLINEIRVEP SSSSTGDVSA SPTKDRKRIN
101: VDSTVQKPSV SGQNQKKYRG VRQRPWGKWA AEIRDPEQRR RIWLGTFATA EEAAIVYDNA AIKLRGPDAL TNFTVQPEPE PVQEQEQEPE SNMSVSISES
201: MDDSQHLSSP TSVLNYQTYV SEEPIDSLIK PVKQEFLEPE QEPISWHLGE GNTNTNDDSF PLDITFLDNY FNESLPDISI FDQPMSPIQP TENDFFNDLM
301: LFDSNAEEYY SSEIKEIGSS FNDLDDSLIS DLLLV

Arabidopsis Description

CRF4Ethylene-responsive transcription factor CRF4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUE3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.