Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G118000.1 | Wheat | nucleus | 90.37 | 89.81 |
| TraesCS7A01G120100.1 | Wheat | nucleus | 86.34 | 87.42 |
| Zm00001d036251_P001 | Maize | nucleus | 36.96 | 37.78 |
| Zm00001d045262_P001 | Maize | nucleus | 36.96 | 37.78 |
| EER89242 | Sorghum | nucleus, plastid | 39.13 | 37.72 |
| GSMUA_Achr6P32030_001 | Banana | nucleus | 30.43 | 34.15 |
| TraesCS3B01G266800.1 | Wheat | nucleus | 30.12 | 33.11 |
| GSMUA_Achr9P05260_001 | Banana | nucleus | 29.19 | 32.19 |
| TraesCS3B01G176200.1 | Wheat | nucleus | 34.16 | 31.34 |
| TraesCS5B01G426600.1 | Wheat | nucleus | 25.47 | 27.89 |
| TraesCS4B01G122100.1 | Wheat | nucleus | 24.22 | 23.64 |
| TraesCS5B01G178600.1 | Wheat | nucleus | 17.08 | 17.8 |
| TraesCS5B01G481300.1 | Wheat | nucleus | 18.32 | 16.81 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | InterPro:DNA-bd_dom_sf | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 |
| PFAM:PF00847 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF40 | SMART:SM00380 |
| SUPFAM:SSF54171 | EnsemblPlantsGene:TraesCS7B01G018400 | EnsemblPlants:TraesCS7B01G018400.1 | TIGR:cd00018 | SEG:seg | : |
Description
No Description!
Coordinates
chr7B:+:15505882..15506850
Molecular Weight (calculated)
35227.3 Da
IEP (calculated)
4.375
GRAVY (calculated)
-0.363
Length
322 amino acids
Sequence
(BLAST)
(BLAST)
001: MVEPIVAAGK TLNQHRRRVV KEEGEEAAAV AMPRVLRVTF EDRDATDSSS DDSPRQGRRY IEEICIEQPA RMTASPQPQL SPFRRGAILG AKRRADTAEE
101: PKFRGVRRRP WGKYAAEIRD PNKGVRVWLG TFDTAEEAAM VYDSAALRLR GPSATTNFPT SPSPSADPDP ALLTDADGDV GHFLVAATYE ESSDESQFVG
201: SPVSVLRPLE VVASTVNAKP EESTVPVGLK ISVDMCRRGG NYSPFCNADV IVPPEDEDCM FPGLSFAAPT IFDDDGMMSS HLDYYAANVE PLSLLEMGEL
301: PAWREVDVFF DDVLSASPLT EL
101: PKFRGVRRRP WGKYAAEIRD PNKGVRVWLG TFDTAEEAAM VYDSAALRLR GPSATTNFPT SPSPSADPDP ALLTDADGDV GHFLVAATYE ESSDESQFVG
201: SPVSVLRPLE VVASTVNAKP EESTVPVGLK ISVDMCRRGG NYSPFCNADV IVPPEDEDCM FPGLSFAAPT IFDDDGMMSS HLDYYAANVE PLSLLEMGEL
301: PAWREVDVFF DDVLSASPLT EL
001: METEKKVSLP RILRISVTDP YATDSSSDEE EEVDFDALST KRRRVKKYVK EVVLDSVVSD KEKPMKKKRK KRVVTVPVVV TTATRKFRGV RQRPWGKWAA
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
Arabidopsis Description
CRF1Ethylene-responsive transcription factor CRF1 [Source:UniProtKB/Swiss-Prot;Acc:O82503]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.