Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G22985.1 | Thale cress | nucleus | 17.42 | 31.45 |
| AT1G71130.1 | Thale cress | nucleus | 17.07 | 30.43 |
| AT1G68550.2 | Thale cress | nucleus | 31.36 | 27.78 |
| VIT_01s0011g03470.t01 | Wine grape | nucleus | 27.87 | 25.0 |
| KRH43430 | Soybean | nucleus | 28.92 | 24.56 |
| GSMUA_Achr4P06840_001 | Banana | nucleus | 21.25 | 24.02 |
| AT2G46310.1 | Thale cress | nucleus | 24.39 | 23.81 |
| Solyc05g009450.1.1 | Tomato | nucleus | 27.87 | 23.46 |
| GSMUA_Achr9P19330_001 | Banana | mitochondrion | 20.21 | 23.39 |
| PGSC0003DMT400037698 | Potato | nucleus | 27.87 | 23.26 |
| AT3G61630.1 | Thale cress | nucleus | 25.44 | 23.17 |
| EER98690 | Sorghum | nucleus | 22.65 | 23.05 |
| AT3G25890.2 | Thale cress | nucleus | 26.48 | 22.89 |
| KRH35957 | Soybean | nucleus | 28.22 | 22.82 |
| KRH45262 | Soybean | nucleus | 28.92 | 22.8 |
| Solyc04g007180.1.1 | Tomato | nucleus | 26.48 | 22.69 |
| AT4G11140.1 | Thale cress | nucleus | 22.65 | 22.65 |
| GSMUA_Achr4P13800_001 | Banana | nucleus | 21.25 | 22.43 |
| KRG90812 | Soybean | nucleus | 28.22 | 22.01 |
| PGSC0003DMT400041053 | Potato | nucleus | 26.83 | 21.75 |
| TraesCS5B01G178600.1 | Wheat | nucleus | 23.34 | 21.68 |
| Os09t0309700-01 | Rice | nucleus | 23.69 | 21.38 |
| KRH75373 | Soybean | nucleus, plastid | 27.53 | 21.29 |
| TraesCS5A01G180800.1 | Wheat | nucleus | 23.0 | 21.29 |
| TraesCS5D01G185300.1 | Wheat | nucleus | 23.0 | 21.29 |
| HORVU5Hr1G055190.2 | Barley | nucleus | 22.65 | 21.04 |
| GSMUA_Achr1P23090_001 | Banana | nucleus | 21.25 | 20.96 |
| KRH04558 | Soybean | nucleus | 26.13 | 20.22 |
| AT4G23750.1 | Thale cress | nucleus | 24.04 | 20.12 |
| AT5G53290.1 | Thale cress | nucleus | 24.04 | 19.49 |
| OQU89260 | Sorghum | nucleus | 19.51 | 19.44 |
| AT4G27950.1 | Thale cress | nucleus | 22.3 | 19.1 |
| Zm00001d020043_P001 | Maize | plastid | 23.34 | 17.45 |
| GSMUA_Achr10P... | Banana | vacuole | 22.3 | 10.85 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:839133 | UniProt:A0A178WDZ8 | ProteinID:AAG50818.1 | ProteinID:AEE30628.1 |
| ProteinID:AEE30629.1 | EMBL:AK119144 | InterPro:AP2/ERF-transcript_factor | InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT1G25470 |
| EnsemblPlantsGene:AT1G25470 | RefSeq:AT1G25470 | TAIR:AT1G25470 | RefSeq:AT1G25470-TAIR-G | EnsemblPlants:AT1G25470.1 | TAIR:AT1G25470.1 |
| Unigene:At.41335 | EMBL:BT005281 | InterPro:DNA-bd_dom_sf | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009555 | GO:GO:0009719 | GO:GO:0009873 |
| GO:GO:0009987 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_173918.2 | RefSeq:NP_973912.1 | ProteinID:OAP16639.1 |
| PFAM:PF00847 | PIRSF:PIRSF038123 | PO:PO:0000293 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF21 |
| UniProt:Q8GW17 | SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI000000C5C4 | SEG:seg | : |
Description
ERF116Ethylene-responsive transcription factor ERF116 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW17]
Coordinates
chr1:-:8944609..8946628
Molecular Weight (calculated)
31993.1 Da
IEP (calculated)
4.560
GRAVY (calculated)
-0.475
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: MKSFVKPERD SLLRTVRIVF TDPDATDDSS SSSDEWLPKP RKVKRFVHEI TFLPQVSESS QDRSNAVKTP RRKSTRQFKY PVGVRPRPSG KFAAEILNPF
101: TKTKKWLGTY ETPAEAEKAY VDKKVEYDAL ASSGSAVSSS VVTVTSQCLR SPTSASVSCV SADDLSKEKT SLNKDVAASG DSTTKEVFTT FDFSDVKIPD
201: LRFLAAEEDS MVSNANGAEL DFDCFLTDSN ILLDDYSLLE NDINFSRFEN SLPSELPDCD FTEMEFQLDD FKFAYTDHLT TPPLGLV
101: TKTKKWLGTY ETPAEAEKAY VDKKVEYDAL ASSGSAVSSS VVTVTSQCLR SPTSASVSCV SADDLSKEKT SLNKDVAASG DSTTKEVFTT FDFSDVKIPD
201: LRFLAAEEDS MVSNANGAEL DFDCFLTDSN ILLDDYSLLE NDINFSRFEN SLPSELPDCD FTEMEFQLDD FKFAYTDHLT TPPLGLV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.