Factsheet for AT3G61630.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX71724	Canola	nucleus	62.86	68.75
CDY11369	Canola	nucleus	59.05	65.72
CDY52005	Canola	nucleus	57.78	63.41
Bra003462.1-P	Field mustard	nucleus	56.83	63.25
CDY53906	Canola	nucleus	56.51	62.68
AT2G46310.1	Thale cress	nucleus	51.11	54.76
AT1G71130.1	Thale cress	nucleus	21.27	41.61
AT1G22985.1	Thale cress	nucleus	20.63	40.88
VIT_15s0046g01390.t01	Wine grape	nucleus	33.33	33.44
AT4G11140.1	Thale cress	nucleus	29.52	32.4
AT4G27950.1	Thale cress	nucleus	32.7	30.75
AT4G23750.1	Thale cress	nucleus	30.79	28.28
AT5G53290.1	Thale cress	nucleus	31.11	27.68
AT1G25470.1	Thale cress	nucleus	23.17	25.44
AT1G68550.2	Thale cress	nucleus	23.81	23.15
AT3G25890.2	Thale cress	nucleus	19.68	18.67

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:825336	UniProt:A0A178VFH2	ProteinID:AEE80234.1	InterPro:AP2/ERF_dom
InterPro:AP2/ERF_dom_sf	ArrayExpress:AT3G61630	EnsemblPlantsGene:AT3G61630	RefSeq:AT3G61630	TAIR:AT3G61630	RefSeq:AT3G61630-TAIR-G
EnsemblPlants:AT3G61630.1	TAIR:AT3G61630.1	EMBL:BX822244	ProteinID:CAB71093.1	Symbol:CRF6	InterPro:DNA-bd_dom_sf
GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009736	GO:GO:0009790
GO:GO:0009791	GO:GO:0009793	GO:GO:0009873	GO:GO:0009987	GO:GO:0042991	GO:GO:0043565
GO:GO:0048366	GO:GO:0048825	InterPro:IPR001471	InterPro:IPR036955	RefSeq:NP_191722.1	ProteinID:OAP04418.1
PFAM:PF00847	PO:PO:0000230	PO:PO:0000293	PO:PO:0001078	PO:PO:0001185	PO:PO:0004507
PO:PO:0007115	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009025
PO:PO:0009030	PO:PO:0009031	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020137
PO:PO:0025022	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF43	UniProt:Q9M374
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI00000A75D4	SEG:seg	:	:

Description

CRF6CRF6 [Source:UniProtKB/TrEMBL;Acc:A0A178VFH2]

Coordinates

chr3:+:22804998..22806527

Molecular Weight (calculated)

35575.1 Da

IEP (calculated)

4.688

GRAVY (calculated)

-0.668

Length

315 amino acids

Sequence
(BLAST)

001: MERRTRRVKF TENRTVTNVA ATPSNGSPRL VRITVTDPFA TDSSSDDDDN NNVTVVPRVK RYVKEIRFCQ GESSSSTAAR KGKHKEEESV VVEDDVSTSV
101: KPKKYRGVRQ RPWGKFAAEI RDPSSRTRIW LGTFVTAEEA AIAYDRAAIH LKGPKALTNF LTPPTPTPVI DLQTVSACDY GRDSRQSLHS PTSVLRFNVN
201: EETEHEIEAI ELSPERKSTV IKEEEESSAG LVFPDPYLLP DLSLAGECFW DTEIAPDLLF LDEETKIQST LLPNTEVSKQ GENETEDFEF GLIDDFESSP
301: WDVDHFFDHH HHSFD

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.