Factsheet for AT2G46310.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95687	Canola	nucleus	57.48	66.54
Bra004548.1-P	Field mustard	nucleus	59.52	65.06
CDX80006	Canola	nucleus	59.52	65.06
CDY42030	Canola	nucleus	57.48	61.9
AT3G61630.1	Thale cress	nucleus	54.76	51.11
AT1G71130.1	Thale cress	nucleus	22.11	40.37
AT1G22985.1	Thale cress	nucleus	21.43	39.62
AT4G11140.1	Thale cress	nucleus	32.65	33.45
VIT_15s0046g01390.t01	Wine grape	nucleus	35.37	33.12
AT5G53290.1	Thale cress	nucleus	33.67	27.97
AT4G27950.1	Thale cress	nucleus	31.63	27.76
AT4G23750.1	Thale cress	nucleus	31.97	27.41
AT1G25470.1	Thale cress	nucleus	23.81	24.39
AT1G68550.2	Thale cress	nucleus	26.53	24.07
AT3G25890.2	Thale cress	nucleus	18.71	16.57

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	EntrezGene:819239	ProteinID:AAC62875.1	ProteinID:AEC10675.1	EMBL:AK227661
InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	ArrayExpress:AT2G46310	EnsemblPlantsGene:AT2G46310	RefSeq:AT2G46310	TAIR:AT2G46310
RefSeq:AT2G46310-TAIR-G	EnsemblPlants:AT2G46310.1	TAIR:AT2G46310.1	EMBL:AY074638	EMBL:BT003121	Symbol:CRF5
InterPro:DNA-bd_dom_sf	GO:GO:0000003	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0007154	GO:GO:0007165
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009719	GO:GO:0009736
GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009873	GO:GO:0009987	GO:GO:0042991
GO:GO:0048366	GO:GO:0048825	InterPro:IPR001471	InterPro:IPR036955	RefSeq:NP_182154.1	UniProt:O82339
PFAM:PF00847	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009005
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009031	PO:PO:0009046	PO:PO:0009052
PO:PO:0020137	PO:PO:0025022	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF43
SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000000BEF7	SEG:seg	:	:

Description

CRF5Ethylene-responsive transcription factor CRF5 [Source:UniProtKB/Swiss-Prot;Acc:O82339]

Coordinates

chr2:+:19011462..19013018

Molecular Weight (calculated)

33157.5 Da

IEP (calculated)

4.845

GRAVY (calculated)

-0.683

Length

294 amino acids

Sequence
(BLAST)

001: MKSRVRKSKY TVHRKITSTP FDGFPKIVKI IVTDPCATDS SSDEENDNKS VAPRVKRYVD EIRFCDEDDE PKPARKAKKK SPAAAAENGG DLVKSVVKYR
101: GVRQRPWGKF AAEIRDPSSR TRLWLGTFAT AEEAAIGYDR AAIRIKGHNA QTNFLTPPPS PTTEVLPETP VIDLETVSGC DSARESQISL CSPTSVLRFS
201: HNDETEYRTE PTEEQNPFFL PDLFRSGDYF WDSEITPDPL FLDEFHQSLL PNINNNNTVC DKDTNLSDSF PLGVIGDFSS WDVDEFFQDH LLDK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.