Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY10965 | Canola | nucleus | 67.93 | 78.72 |
| CDY47623 | Canola | nucleus | 71.43 | 77.78 |
| Bra013730.1-P | Field mustard | nucleus | 71.43 | 77.78 |
| Bra019270.1-P | Field mustard | nucleus | 69.97 | 77.42 |
| CDX94215 | Canola | nucleus | 70.55 | 77.07 |
| CDY03521 | Canola | nucleus | 70.85 | 75.47 |
| AT4G11140.1 | Thale cress | nucleus | 50.44 | 60.28 |
| AT1G22985.1 | Thale cress | nucleus | 22.45 | 48.43 |
| KRG92510 | Soybean | nucleus | 26.53 | 47.15 |
| AT1G71130.1 | Thale cress | nucleus | 20.99 | 44.72 |
| KRH41287 | Soybean | nucleus | 36.73 | 43.0 |
| KRH27859 | Soybean | nucleus | 35.57 | 42.21 |
| KRH77624 | Soybean | nucleus | 35.57 | 40.94 |
| PGSC0003DMT400032058 | Potato | nucleus | 38.48 | 39.05 |
| Solyc08g081960.1.1 | Tomato | nucleus | 38.19 | 38.64 |
| KRH60010 | Soybean | nucleus | 37.03 | 38.02 |
| AT5G53290.1 | Thale cress | nucleus | 33.82 | 32.77 |
| AT4G27950.1 | Thale cress | nucleus | 31.78 | 32.54 |
| AT2G46310.1 | Thale cress | nucleus | 27.41 | 31.97 |
| AT3G61630.1 | Thale cress | nucleus | 28.28 | 30.79 |
| AT1G68550.2 | Thale cress | nucleus | 23.62 | 25.0 |
| AT1G25470.1 | Thale cress | nucleus | 20.12 | 24.04 |
| AT3G25890.2 | Thale cress | nucleus | 21.28 | 21.99 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:828475 | UniProt:A0A178V319 | ProteinID:AEE84801.1 | ProteinID:AEE84802.1 |
| InterPro:AP2/ERF_dom | InterPro:AP2/ERF_dom_sf | ArrayExpress:AT4G23750 | EnsemblPlantsGene:AT4G23750 | RefSeq:AT4G23750 | TAIR:AT4G23750 |
| RefSeq:AT4G23750-TAIR-G | EnsemblPlants:AT4G23750.1 | TAIR:AT4G23750.1 | EMBL:AY057475 | EMBL:AY140049 | Unigene:At.26323 |
| EMBL:BT015038 | ProteinID:CAA23041.1 | ProteinID:CAB81293.1 | Symbol:CRF2 | InterPro:DNA-bd_dom_sf | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009736 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009873 | GO:GO:0009987 | GO:GO:0042802 | GO:GO:0042991 | GO:GO:0043565 | GO:GO:0048364 |
| GO:GO:0048825 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_194106.1 | RefSeq:NP_974599.1 | ProteinID:OAP00114.1 |
| PFAM:PF00847 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 | PO:PO:0020038 | PO:PO:0020137 | PO:PO:0025022 |
| PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF42 | UniProt:Q9SUQ2 | SMART:SM00380 |
| SUPFAM:SSF54171 | UniParc:UPI00000A579C | SEG:seg | : | : | : |
Description
CRF2Ethylene-responsive transcription factor CRF2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUQ2]
Coordinates
chr4:+:12376122..12378032
Molecular Weight (calculated)
37874.4 Da
IEP (calculated)
6.685
GRAVY (calculated)
-0.503
Length
343 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEKKMVLP RIKFTEHKTN TTTIVSELTN THQTRILRIS VTDPDATDSS SDDEEEEHQR FVSKRRRVKK FVNEVYLDSG AVVTGSCGQM ESKKRQKRAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV
101: KSESTVSPVV SATTTTTGEK KFRGVRQRPW GKWAAEIRDP LKRVRLWLGT YNTAEEAAMV YDNAAIQLRG PDALTNFSVT PTTATEKKAP PPSPVKKKKK
201: KNNKSKKSVT ASSSISRSSS NDCLCSPVSV LRSPFAVDEF SGISSSPVAA VVVKEEPSMT TVSETFSDFS APLFSDDDVF DFRSSVVPDY LGGDLFGEDL
301: FTADMCTDMN FGFDFGSGLS SWHMEDHFQD IGDLFGSDPL LAV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.