Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY05133 | Canola | nucleus | 64.81 | 67.15 |
| Bra000736.1-P | Field mustard | nucleus | 63.76 | 67.03 |
| CDX90774 | Canola | nucleus | 63.76 | 66.06 |
| AT1G22985.1 | Thale cress | nucleus | 28.22 | 50.94 |
| AT4G23750.1 | Thale cress | nucleus | 60.28 | 50.44 |
| AT1G71130.1 | Thale cress | nucleus | 25.78 | 45.96 |
| KRG92510 | Soybean | nucleus | 27.53 | 40.93 |
| KRH41287 | Soybean | nucleus | 38.68 | 37.88 |
| KRH27859 | Soybean | nucleus | 37.63 | 37.37 |
| KRH77624 | Soybean | nucleus | 38.68 | 37.25 |
| PGSC0003DMT400032058 | Potato | nucleus | 40.07 | 34.02 |
| Solyc08g081960.1.1 | Tomato | nucleus | 39.37 | 33.33 |
| AT2G46310.1 | Thale cress | nucleus | 33.45 | 32.65 |
| KRH60010 | Soybean | nucleus | 37.98 | 32.63 |
| AT3G61630.1 | Thale cress | nucleus | 32.4 | 29.52 |
| AT4G27950.1 | Thale cress | nucleus | 32.06 | 27.46 |
| AT5G53290.1 | Thale cress | nucleus | 33.8 | 27.4 |
| AT1G68550.2 | Thale cress | nucleus | 27.53 | 24.38 |
| AT1G25470.1 | Thale cress | nucleus | 22.65 | 22.65 |
| AT3G25890.2 | Thale cress | nucleus | 23.0 | 19.88 |
Protein Annotations
| MapMan:15.5.7.1 | Gene3D:3.30.730.10 | EntrezGene:826715 | ProteinID:AAC35537.1 | ProteinID:AEE82977.1 | InterPro:AP2/ERF_dom |
| InterPro:AP2/ERF_dom_sf | ArrayExpress:AT4G11140 | EnsemblPlantsGene:AT4G11140 | RefSeq:AT4G11140 | TAIR:AT4G11140 | RefSeq:AT4G11140-TAIR-G |
| EnsemblPlants:AT4G11140.1 | TAIR:AT4G11140.1 | EMBL:AY560849 | EMBL:BT025176 | ProteinID:CAB43049.1 | ProteinID:CAB81215.1 |
| Symbol:CRF1 | InterPro:DNA-bd_dom_sf | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 |
| GO:GO:0009736 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009873 | GO:GO:0009987 | GO:GO:0042991 |
| GO:GO:0048366 | GO:GO:0048825 | InterPro:IPR001471 | InterPro:IPR036955 | RefSeq:NP_192852.1 | UniProt:O82503 |
| PFAM:PF00847 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 |
| PO:PO:0007115 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0020038 | PO:PO:0025022 | PRINTS:PR00367 | PFscan:PS51032 | PANTHER:PTHR31194 | PANTHER:PTHR31194:SF14 |
| SMART:SM00380 | SUPFAM:SSF54171 | UniParc:UPI00000A373B | SEG:seg | : | : |
Description
CRF1Ethylene-responsive transcription factor CRF1 [Source:UniProtKB/Swiss-Prot;Acc:O82503]
Coordinates
chr4:-:6794630..6796398
Molecular Weight (calculated)
31546.9 Da
IEP (calculated)
4.642
GRAVY (calculated)
-0.341
Length
287 amino acids
Sequence
(BLAST)
(BLAST)
001: METEKKVSLP RILRISVTDP YATDSSSDEE EEVDFDALST KRRRVKKYVK EVVLDSVVSD KEKPMKKKRK KRVVTVPVVV TTATRKFRGV RQRPWGKWAA
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
101: EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL NFPPPPVTEN VEEASTEVKG VSDFIIGGGE CLRSPVSVLE SPFSGESTAV KEEFVGVSTA
201: EIVVKKEPSF NGSDFSAPLF SDDDVFGFST SMSESFGGDL FGDNLFADMS FGSGFGFGSG SGFSSWHVED HFQDIGDLFG SDPVLTV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.