Factsheet for Bra025170.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13596	Canola	nucleus	97.48	97.79
CDX83568	Canola	nucleus	94.03	95.53
AT3G25890.2	Thale cress	nucleus	80.19	76.81
Bra036360.1-P	Field mustard	nucleus	67.3	76.16
Bra004318.1-P	Field mustard	nucleus	37.11	38.82
Bra004033.1-P	Field mustard	nucleus	37.42	37.54
Bra033923.1-P	Field mustard	nucleus	36.79	37.03
Bra024743.1-P	Field mustard	plastid	34.59	32.93
VIT_01s0011g03470.t01	Wine grape	nucleus	32.39	32.19
Solyc05g009450.1.1	Tomato	nucleus	33.02	30.79
Bra012352.1-P	Field mustard	nucleus	14.15	30.61
PGSC0003DMT400037698	Potato	nucleus	32.7	30.23
Bra016367.1-P	Field mustard	nucleus	14.78	29.75
Bra007963.1-P	Field mustard	nucleus	15.09	28.74
Bra003936.1-P	Field mustard	nucleus	14.47	27.88
KRH45262	Soybean	nucleus	31.76	27.75
KRH35957	Soybean	nucleus	30.5	27.32
KRH75373	Soybean	nucleus, plastid	31.45	26.95
KRH43430	Soybean	nucleus	28.62	26.92
Solyc04g007180.1.1	Tomato	nucleus	27.67	26.27
PGSC0003DMT400041053	Potato	nucleus	28.93	25.99
KRG90812	Soybean	nucleus	29.25	25.27
GSMUA_Achr4P13800_001	Banana	nucleus	21.38	25.0
GSMUA_Achr4P06840_001	Banana	nucleus	19.5	24.41
GSMUA_Achr9P19330_001	Banana	mitochondrion	18.24	23.39
Bra019270.1-P	Field mustard	nucleus	21.7	22.26
Bra013730.1-P	Field mustard	nucleus	21.7	21.9
KRH04558	Soybean	nucleus	25.16	21.56
GSMUA_Achr1P23090_001	Banana	nucleus	18.87	20.62
Bra003462.1-P	Field mustard	nucleus	17.92	20.14
Bra029079.1-P	Field mustard	nucleus	21.07	19.53
Os09t0309700-01	Rice	nucleus	19.18	19.18
TraesCS5B01G178600.1	Wheat	nucleus	18.24	18.77
Bra022643.1-P	Field mustard	nucleus	20.75	18.75
TraesCS5D01G185300.1	Wheat	nucleus	18.24	18.71
TraesCS5A01G180800.1	Wheat	nucleus	18.24	18.71
Bra003068.1-P	Field mustard	nucleus	21.38	18.68
Bra000736.1-P	Field mustard	nucleus	16.04	18.68
Bra004548.1-P	Field mustard	nucleus	15.72	18.59
Bra026295.1-P	Field mustard	nucleus	19.18	18.1
EER98690	Sorghum	nucleus	16.04	18.09
Bra040839.1-P	Field mustard	nucleus	18.24	17.85
HORVU5Hr1G055190.2	Barley	nucleus	17.3	17.8
OQU89260	Sorghum	nucleus	16.04	17.71
Bra010389.1-P	Field mustard	nucleus	18.24	17.68
Zm00001d020043_P001	Maize	plastid	18.24	15.1
GSMUA_Achr10P...	Banana	vacuole	25.47	13.73

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra025170	EnsemblPlants:Bra025170.1
EnsemblPlants:Bra025170.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4E8R4	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF21	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI000253F717	SEG:seg

Description

AT3G25890 (E=1e-119) | AP2 domain-containing transcription factor, putative

Coordinates

chrA06:-:22969459..22970415

Molecular Weight (calculated)

35230.3 Da

IEP (calculated)

4.793

GRAVY (calculated)

-0.534

Length

318 amino acids

Sequence
(BLAST)

001: MAEPKKRSSL HATKPSKKPK KKPFQLNRLP GLSEDLKTMR KIRFVVNDPY ATDYSSGEED VEMTRRRKRY VCEIDRPFSQ ATAQAESESS YVQESRNNGG
101: SKKALSGKAS QVVGRSSVTK PVGVRQRKWG KWAAEIRHPI TKTRTWLGTY ETLEQAADAY ATKKLEFDAL AAASSAAAPC DSTASNETVS MVSNVEAVSS
201: IDRDMKVTDS KKPSFDFNFA DLQIPDMGCF IDESLIPNAC ELDFFLTEEK DDQLLDDYCG IDDMNIIGLE CDGPSELPDY DFSDVEIDLG LIGTTIDKFA
301: FVDHLATSTT TPLNIACP

Best Arabidopsis Sequence Match ( AT3G25890.2 )
(BLAST)

001: MAERKKRSSI QTNKPNKKPM KKKPFQLNHL PGLSEDLKTM RKLRFVVNDP YATDYSSSEE EERSQRRKRY VCEIDLPFAQ AATQAESESS YCQESNNNGV
101: SKTKISACSK KVLRSKASPV VGRSSTTVSK PVGVRQRKWG KWAAEIRHPI TKVRTWLGTY ETLEQAADAY ATKKLEFDAL AAATSAASSV LSNESGSMIS
201: ASGSSIDLDK KLVDSTLDQQ AGESKKASFD FDFADLQIPE MGCFIDDSFI PNACELDFLL TEENNNQMLD DYCGIDDLDI IGLECDGPSE LPDYDFSDVE
301: IDLGLIGTTI DKYAFVDHIA TTTPTPLNIA CP

Arabidopsis Description

ERF119Ethylene-responsive transcription factor ERF119 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.