Factsheet for Bra036360.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40978	Canola	nucleus	90.04	100.0
Bra025170.1-P	Field mustard	nucleus	76.16	67.3
AT3G25890.2	Thale cress	nucleus	71.89	60.84
Bra004318.1-P	Field mustard	nucleus	39.15	36.18
Bra004033.1-P	Field mustard	nucleus	39.15	34.7
Bra033923.1-P	Field mustard	nucleus	38.43	34.18
Bra024743.1-P	Field mustard	plastid	39.5	33.23
Bra012352.1-P	Field mustard	nucleus	16.01	30.61
Solyc05g009450.1.1	Tomato	nucleus	36.65	30.21
Bra003936.1-P	Field mustard	nucleus	17.44	29.7
VIT_01s0011g03470.t01	Wine grape	nucleus	33.45	29.38
Bra007963.1-P	Field mustard	nucleus	17.44	29.34
PGSC0003DMT400037698	Potato	nucleus	35.59	29.07
Bra016367.1-P	Field mustard	nucleus	16.01	28.48
KRH45262	Soybean	nucleus	32.74	25.27
KRH75373	Soybean	nucleus, plastid	32.38	24.53
KRH35957	Soybean	nucleus	30.96	24.51
PGSC0003DMT400041053	Potato	nucleus	30.61	24.29
Solyc04g007180.1.1	Tomato	nucleus	28.83	24.18
KRH43430	Soybean	nucleus	28.47	23.67
GSMUA_Achr4P06840_001	Banana	nucleus	20.28	22.44
GSMUA_Achr4P13800_001	Banana	nucleus	21.71	22.43
KRG90812	Soybean	nucleus	29.18	22.28
GSMUA_Achr9P19330_001	Banana	mitochondrion	19.22	21.77
Bra019270.1-P	Field mustard	nucleus	23.49	21.29
Bra013730.1-P	Field mustard	nucleus	23.84	21.27
Bra000736.1-P	Field mustard	nucleus	18.86	19.41
KRH04558	Soybean	nucleus	25.62	19.41
Bra004548.1-P	Field mustard	nucleus	18.51	19.33
Os09t0309700-01	Rice	nucleus	21.71	19.18
EER98690	Sorghum	nucleus	19.22	19.15
Bra003462.1-P	Field mustard	nucleus	19.22	19.08
GSMUA_Achr1P23090_001	Banana	nucleus	19.57	18.9
TraesCS5D01G185300.1	Wheat	nucleus	20.28	18.39
TraesCS5A01G180800.1	Wheat	nucleus	20.28	18.39
OQU89260	Sorghum	nucleus	18.51	18.06
HORVU5Hr1G055190.2	Barley	nucleus	19.57	17.8
TraesCS5B01G178600.1	Wheat	nucleus	19.57	17.8
Bra029079.1-P	Field mustard	nucleus	21.71	17.78
Bra040839.1-P	Field mustard	nucleus	20.28	17.54
Bra003068.1-P	Field mustard	nucleus	22.42	17.31
Bra026295.1-P	Field mustard	nucleus	20.64	17.21
Bra010389.1-P	Field mustard	nucleus	19.93	17.07
Bra022643.1-P	Field mustard	nucleus	21.35	17.05
Zm00001d020043_P001	Maize	plastid	21.71	15.89
GSMUA_Achr10P...	Banana	vacuole	27.76	13.22

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	EnsemblPlantsGene:Bra036360	EnsemblPlants:Bra036360.1
EnsemblPlants:Bra036360.1-P	InterPro:DNA-bd_dom_sf	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139
GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR001471	InterPro:IPR036955	UniProt:M4F5K4	PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032
PANTHER:PTHR31194	PANTHER:PTHR31194:SF21	SMART:SM00380	SUPFAM:SSF54171	UniParc:UPI0002545B92	:

Description

AT1G68550 (E=2e-033) | AP2 domain-containing transcription factor, putative

Coordinates

chrA02:-:22885035..22885880

Molecular Weight (calculated)

31642.7 Da

IEP (calculated)

4.978

GRAVY (calculated)

-0.630

Length

281 amino acids

Sequence
(BLAST)

001: MSEPKKRSSL QAKKPSKNHK RKTFQINRLP GLSEDLKTMR KLRFVVSDPY ATDYSSSEED ETYQTRKRYV CEIDRPFSHA TTQSESESSS CHNDGSKAKT
101: SDVVGRSSVR KPVGVRQRKW GKWAAEIRHP ITKIRTWLGT YDTLEQAADA YAAKKLEFDA LSAGVSSVLS ENALSDDSAS GFNVDFNFSD LQIPDMGCFV
201: DESLILNACE LDFHLPEESD QFLNDMNFIG LERDGPNNLP DYDFSDVEFD LGLVGNTIDN KFNFFDRLAT TTTTPLNIAC L

Best Arabidopsis Sequence Match ( AT3G25890.2 )
(BLAST)

001: MAERKKRSSI QTNKPNKKPM KKKPFQLNHL PGLSEDLKTM RKLRFVVNDP YATDYSSSEE EERSQRRKRY VCEIDLPFAQ AATQAESESS YCQESNNNGV
101: SKTKISACSK KVLRSKASPV VGRSSTTVSK PVGVRQRKWG KWAAEIRHPI TKVRTWLGTY ETLEQAADAY ATKKLEFDAL AAATSAASSV LSNESGSMIS
201: ASGSSIDLDK KLVDSTLDQQ AGESKKASFD FDFADLQIPE MGCFIDDSFI PNACELDFLL TEENNNQMLD DYCGIDDLDI IGLECDGPSE LPDYDFSDVE
301: IDLGLIGTTI DKYAFVDHIA TTTPTPLNIA CP

Arabidopsis Description

ERF119Ethylene-responsive transcription factor ERF119 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUA2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.