Factsheet for Solyc03g119580.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014358	Potato	nucleus	84.16	83.29
KRH39204	Soybean	nucleus	12.99	29.59
Solyc01g014720.1.1	Tomato	nucleus	12.73	28.16
KRH48474	Soybean	nucleus	22.6	27.8
GSMUA_Achr4P06840_001	Banana	nucleus	17.14	25.98
GSMUA_Achr9P19330_001	Banana	mitochondrion	16.62	25.81
GSMUA_Achr4P13800_001	Banana	nucleus	17.66	25.0
Solyc04g007180.1.1	Tomato	nucleus	20.52	23.58
Solyc06g082590.1.1	Tomato	nucleus	14.29	22.18
Solyc05g009450.1.1	Tomato	nucleus	19.48	21.99
GSMUA_Achr1P23090_001	Banana	nucleus	16.36	21.65
EER98690	Sorghum	nucleus	15.58	21.28
Solyc01g008880.1.1	Tomato	nucleus	10.91	21.11
TraesCS5B01G178600.1	Wheat	nucleus	16.62	20.71
Solyc01g095500.2.1	Tomato	nucleus	15.58	20.48
HORVU5Hr1G055190.2	Barley	nucleus	16.36	20.39
TraesCS5D01G185300.1	Wheat	nucleus	16.36	20.32
TraesCS5A01G180800.1	Wheat	nucleus	16.1	20.0
Os09t0309700-01	Rice	nucleus	16.1	19.5
Solyc08g081960.1.1	Tomato	nucleus	16.36	18.58
OQU89260	Sorghum	nucleus	13.77	18.4
Solyc06g051840.1.1	Tomato	nucleus	16.62	18.29
Solyc03g007460.1.1	Tomato	nucleus	17.66	17.17
Zm00001d020043_P001	Maize	plastid	16.1	16.15
Solyc01g008890.2.1	Tomato	nucleus	12.47	15.84
GSMUA_Achr10P...	Banana	vacuole	18.7	12.2

Protein Annotations

MapMan:15.5.7.1	Gene3D:3.30.730.10	InterPro:AP2/ERF_dom	InterPro:AP2/ERF_dom_sf	InterPro:DNA-bd_dom_sf	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR001471	InterPro:IPR036955	UniProt:K4BMA7
PFAM:PF00847	PRINTS:PR00367	PFscan:PS51032	PANTHER:PTHR31194	PANTHER:PTHR31194:SF1	SMART:SM00380
SUPFAM:SSF54171	EnsemblPlantsGene:Solyc03g119580.1	EnsemblPlants:Solyc03g119580.1.1	UniParc:UPI00027665DC	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:68137206..68138363

Molecular Weight (calculated)

43281.2 Da

IEP (calculated)

5.132

GRAVY (calculated)

-0.509

Length

385 amino acids

Sequence
(BLAST)

001: MDGCISSVRK VRIVYDDPDA TDSESDDDQN AARFDKNVNR IKRVVKEIVI PVVSWENDFK KCSKLDNIRI KDSKKIHENK KVQLKSTALP KGVRMRKWGK
101: YAAEIRDPSQ GKRIWLGTFE TVEAASQAYE AKRAEFDRII SLGKGKNLSP GPAECSMACT SHPTNGKNRV YSHPSPSSVL DVPTSSAAAP VESNENLTRD
201: MARMPDSGSE DFSLSFEDQM LHEFIKQRQG ISELIEHPLI EQGSISNSVM EMTEVNIRKK TKARQPTIAS CKILTKGTED YSNDKSIFSV LNEPTIMSPI
301: HTELLHLNIE ETAVTGNSLK LLGFDDNALF DKDISQLFDP YADAICLDNT FQCCDGWNEC VYCKIFKDEV DLDEVDLRWL DAVLV

Best Arabidopsis Sequence Match ( AT1G68550.1 )
(BLAST)

001: MVAIRKEQSL SGVSSEIKKR AKRNTLSSLP QETQPLRKVR IIVNDPYATD DSSSDEEELK VPKPRKMKRI VREINFPSME VSEQPSESSS QDSTKTDGKI
101: AVSASPAVPR KKPVGVRQRK WGKWAAEIRD PIKKTRTWLG TFDTLEEAAK AYDAKKLEFD AIVAGNVSTT KRDVSSSETS QCSRSSPVVP VEQDDTSASA
201: LTCVNNPDDV STVAPTAPTP NVPAGGNKET LFDFDFTNLQ IPDFGFLAEE QQDLDFDCFL ADDQFDDFGL LDDIQGFEDN GPSALPDFDF ADVEDLQLAD
301: SSFGFLDQLA PINISCPLKS FAAS

Arabidopsis Description

ERF118Ethylene-responsive transcription factor ERF118 [Source:UniProtKB/Swiss-Prot;Acc:Q9CA27]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.