Factsheet for GSMUA_Achr8P01920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid, mitochondrion

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P04420_001
GSMUA_Achr1P14280_001
GSMUA_Achr2P08600_001
GSMUA_Achr3P25830_001
GSMUA_Achr4P01340_001
GSMUA_Achr5P08880_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G58550.1	GSMUA_Achr1P04420_001	AT5G65800.1	15118728
AT5G58550.1	GSMUA_Achr1P14280_001	AT5G65800.1	15118728
AT5G58550.1	GSMUA_Achr2P08600_001	AT5G65800.1	15118728
AT5G58550.1	GSMUA_Achr3P25830_001	AT5G65800.1	15118728
AT5G58550.1	GSMUA_Achr4P01340_001	AT5G65800.1	15118728
AT5G58550.1	GSMUA_Achr5P08880_001	AT5G65800.1	15118728

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P32850_001	Banana	mitochondrion, plastid	82.49	82.15
Os03t0294700-01	Rice	cytosol	42.18	75.79
Bra022691.1-P	Field mustard	cytosol	4.56	72.13
CDY14376	Canola	cytosol	4.56	72.13
TraesCS4D01G193600.2	Wheat	cytosol, plastid	64.97	65.04
TraesCS4A01G111500.1	Wheat	cytosol, plastid	65.08	64.88
TraesCS4B01G192300.1	Wheat	cytosol, plastid	64.46	64.46
HORVU4Hr1G055900.5	Barley	cytosol, plastid	64.56	64.43
EER95025	Sorghum	plastid	63.52	63.46
Zm00001d028769_P004	Maize	plastid	63.21	63.02
CDX90635	Canola	cytosol	59.79	62.04
CDX91443	Canola	cytosol, plastid	58.45	61.64
Zm00001d047721_P001	Maize	plastid	61.97	61.59
CDY29045	Canola	cytosol	59.59	61.5
Bra012838.1-P	Field mustard	cytosol	58.76	61.5
CDX78038	Canola	cytosol	58.55	61.48
VIT_08s0058g00260.t01	Wine grape	cytosol	60.41	61.3
CDX74897	Canola	plastid	57.72	61.14
KRH65637	Soybean	cytosol	60.73	61.04
Bra005123.1-P	Field mustard	plastid	57.72	61.01
KRH76003	Soybean	cytosol	60.21	60.9
Bra006875.1-P	Field mustard	cytosol	59.27	60.79
AT3G51770.2	Thale cress	cytosol	60.31	60.69
CDX73693	Canola	cytosol	59.27	60.66
CDY14472	Canola	cytosol	56.37	60.44
VIT_06s0004g07020.t01	Wine grape	cytosol	57.1	59.44
PGSC0003DMT400068499	Potato	cytosol, plastid	57.41	59.0
Bra000048.1-P	Field mustard	cytosol, plastid	56.99	58.89
Solyc09g055310.2.1	Tomato	cytosol	55.44	58.79
CDY07743	Canola	cytosol, plastid	56.89	58.78
PGSC0003DMT400041081	Potato	cytosol	57.31	58.39
Solyc10g076450.1.1	Tomato	cytosol	57.31	58.27
KRH72722	Soybean	cytosol, plastid	54.4	56.03
KRG98245	Soybean	plastid	53.68	55.58
KRH30203	Soybean	plastid	53.58	55.29
PGSC0003DMT400051035	Potato	cytosol, mitochondrion, nucleus	4.04	54.93
KRH17084	Soybean	plastid	53.99	54.55
CDY32974	Canola	plastid	48.7	50.98
AT5G58550.1	Thale cress	cytosol, mitochondrion, plastid	48.39	50.49
GSMUA_Achr4P28450_001	Banana	cytosol	46.22	50.4
CDY66209	Canola	plastid	48.29	50.38
Bra002638.1-P	Field mustard	plastid	47.98	50.22
GSMUA_Achr4P21140_001	Banana	cytosol	46.42	50.17

Protein Annotations

Gene3D:1.25.40.10	MapMan:11.5.1.3	Gene3D:3.30.710.10	ncoils:Coil	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr8G01920_001	EnsemblPlants:GSMUA_Achr8P01920_001	EnsemblPlants:GSMUA_Achr8T01920_001	InterPro:IPR011990	InterPro:IPR019734
UniProt:M0TLU4	PFAM:PF13181	PANTHER:PTHR44203	PANTHER:PTHR44203:SF3	InterPro:SKP1/BTB/POZ_sf	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF54695	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0002969B7F	SEG:seg

Description

Ethylene-overproduction protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G01920_001]

Coordinates

chr8:-:1432050..1436389

Molecular Weight (calculated)

107541.0 Da

IEP (calculated)

6.874

GRAVY (calculated)

-0.259

Length

965 amino acids

Sequence
(BLAST)

001: MQNHFLTTLR SLKLIDGCKG TQVYAVNPAV SNSNAPSSSS SDKPLLRSTF SLRNKSIQGC NGGGGGGGGL HHCPSYLLLD SLLPFGLPSA DRIDPPVDPF
101: LRPVDPVSAL SDSFRRLSST SDANSGTGAE RLLLLCDLYL EQHSLLRPLA DPKLLRRTLR SARLHAPDTH HRVVLSAWLR FERREDQLFP SSFPSPLSAC
201: TTTSPSLECP RAALLSTSND LLCPCRRPPP VPSPSPSSSS SSFRRHEPEE GADADVWFCI GDDEVPCVRS NIAALSKPLS TLLCGGFAEA QRERISFTHN
301: GISARGMKAV DVFSRTGRLD EFPPDTVLEL LAFANKFCCE GLKSACDLKL AYLVRSLDDA LLLVEYGLEE MAYLLVAACL QVFLRMLPKS LGDTEITRLL
401: CTQEGRKRLD AAGHASFVLY HLLSQVAMEE DMKSNTTVML LERLVETAAP GWQKQLALHQ LGCVMLERGE YKDAQRWFAK ATSEGHVYSQ VGVARAKFKK
501: GHKYSAYKLA SGLIDEHEHV GWMHQERSLY CIGKEKMADL RIATKLDPTL AYPYKLRAIA LMEDDKVGAA IAEINKIIGF KVSTDCLELR AWFLLALEDY
601: EGALQDLRAL MTLNPNYMMF HGKLHGDQLI DILQQNVKLW DMADCWMQLY DRWSAVDDIG SLAVVHQMLA KEPMNSSLRF RQSLLLLRLN CQKAAMHSLR
701: LARNHSTHEH ERLIYEGWIL YDTGHRDEAL AKSEESLSLQ RSFEAFFLKA YALADSSLDP ASSSYVIQLL EQANSCASDN LRKGQAHNNM GSIYVDCDML
801: DEAAECYLKA LGIKHTRAHQ GLARVYYLKN QKKAAYDEMT KLIEKAKNNA SAYEKRSEYC DRDMAKSDLN MATRLDPLRT YPYRYRAAVL MDEHKEHDAI
901: AELSGAIAFK PDLQLLHLRA AFYDSIGDSA STSRDCEAAL CLDPTHSDTL DLYKKALGTA DPQST

Best Arabidopsis Sequence Match ( AT3G51770.2 )
(BLAST)

001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK

Arabidopsis Description

ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.