Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006875.1-P | Field mustard | cytosol | 97.56 | 97.77 |
| CDX78038 | Canola | cytosol | 94.49 | 96.95 |
| CDY29045 | Canola | cytosol | 89.29 | 90.05 |
| CDX90635 | Canola | cytosol | 87.59 | 88.82 |
| AT3G51770.2 | Thale cress | cytosol | 88.34 | 86.86 |
| CDX91443 | Canola | cytosol, plastid | 76.88 | 79.23 |
| CDY14472 | Canola | cytosol | 75.08 | 78.67 |
| CDX74897 | Canola | plastid | 75.82 | 78.49 |
| CDY07743 | Canola | cytosol, plastid | 77.2 | 77.94 |
| VIT_08s0058g00260.t01 | Wine grape | cytosol | 72.11 | 71.5 |
| KRH76003 | Soybean | cytosol | 71.47 | 70.65 |
| KRH65637 | Soybean | cytosol | 70.63 | 69.38 |
| CDY14376 | Canola | cytosol | 4.45 | 68.85 |
| Solyc10g076450.1.1 | Tomato | cytosol | 68.19 | 67.76 |
| PGSC0003DMT400068499 | Potato | cytosol, plastid | 67.23 | 67.52 |
| Os03t0294700-01 | Rice | cytosol | 38.39 | 67.41 |
| PGSC0003DMT400041081 | Potato | cytosol | 66.81 | 66.53 |
| GSMUA_Achr6P32850_001 | Banana | mitochondrion, plastid | 62.25 | 60.58 |
| GSMUA_Achr8P01920_001 | Banana | cytosol, mitochondrion, plastid | 60.66 | 59.27 |
| TraesCS4D01G193600.2 | Wheat | cytosol, plastid | 56.52 | 55.29 |
| HORVU4Hr1G055900.5 | Barley | cytosol, plastid | 56.63 | 55.22 |
| TraesCS4B01G192300.1 | Wheat | cytosol, plastid | 56.31 | 55.03 |
| TraesCS4A01G111500.1 | Wheat | cytosol, plastid | 56.42 | 54.96 |
| CDY32974 | Canola | plastid | 53.23 | 54.45 |
| Zm00001d028769_P004 | Maize | plastid | 55.67 | 54.24 |
| CDY66209 | Canola | plastid | 53.02 | 54.05 |
| EER95025 | Sorghum | plastid | 55.04 | 53.73 |
| Zm00001d047721_P001 | Maize | plastid | 55.14 | 53.55 |
| CDY66290 | Canola | cytosol, plastid | 44.22 | 50.12 |
| CDY18003 | Canola | cytosol | 44.01 | 49.88 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:11.5.1.3 | Gene3D:3.30.710.10 | InterPro:BTB/POZ_dom | EnsemblPlants:CDX73693 | ProteinID:CDX73693 |
| ProteinID:CDX73693.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00109287001 |
| InterPro:IPR000210 | InterPro:IPR011990 | InterPro:IPR019734 | PANTHER:PTHR44203 | PANTHER:PTHR44203:SF3 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00028 | SMART:SM00225 | SUPFAM:SSF48452 | SUPFAM:SSF54695 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI0004EC682D | SEG:seg | : | : | : | : |
Description
BnaC08g23100D
Coordinates
chrLK031799:+:2178616..2181999
Molecular Weight (calculated)
106679.0 Da
IEP (calculated)
6.377
GRAVY (calculated)
-0.335
Length
943 amino acids
Sequence
(BLAST)
(BLAST)
001: MQHQHNLFTT MRSLNLAEGC KGTQVYAPPP PPPPQQPGNN ATGGVGDKFL QHLQDHLRVN SIRSKSSRTY PQANVVVSPE SLLPFGLPLT DLLEPRIDPS
101: LKFPDLVDQM AQVYRRIDNC DQSERSGAYL EQCAVFKGLS DPKLFRRSLR SSRQHAIDVH AKVVLSSWLR FERREDELIG TTSMDCCGRI LECPKATLVS
201: GYDPDTVYDP CLCSGASSDV QECSTSEEAL DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFNEMKR GTINFTHNGI SVEGMRAAEI FSRTNRLDNF
301: PPHVVLELLK LANRFCCDEM KSSCDEHLAH LVGTLDEAML LIEYGLEESA YLLVAACLQV FLRELPSSMH NPNVIKIFCS VEGRGRLASL GHASFKLYFF
401: LSQIAMEDDM KSNTTVMILE RLVECAVESW EKQLACHQLG VVMLERKEYK DAQRWFNTAV EAGHLYSLVG VARSKFKRDH RYSAYKIINS LISDHVPTGW
501: MHQERSLYCS GKEKLLDLDT ATELDPTLTF PYKFRAVALV EENQFGAAIS ELNKILGFKA SPDCLEMRAW ISIGKEDYEG ALKDIRALLT LEPNFMMFNG
601: KIHADHMVEL LRPLAQQRSQ ADCWMQLFDH WSTVDDIGSL AVVHDMLAND PGNSLLRFRQ SLLLLRLNCQ KAAMRCLRLA RNHSKLKHER LVYEGWILYD
701: TGHREEALAK AEESISTQRS FEAFFLKAYA LADSTLDPKS AEYVIQLLGE ALRCPSDALR KGQALNNLGS VYVDCEKLDL AGDCYTNALN IKHTRAHQGL
801: ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLSLA TQLDPLRTYP YRYRAAVLMD DHKENEAIEE LSRAISFKPD LQLLHLRAAF
901: YDSMGEGASA IKDCEAALCI DPGHTDTLEL YHKAREANTT DQK
101: LKFPDLVDQM AQVYRRIDNC DQSERSGAYL EQCAVFKGLS DPKLFRRSLR SSRQHAIDVH AKVVLSSWLR FERREDELIG TTSMDCCGRI LECPKATLVS
201: GYDPDTVYDP CLCSGASSDV QECSTSEEAL DYDMSFCIGD EEVRCVRYKI ASLSRPFKAM LYGGFNEMKR GTINFTHNGI SVEGMRAAEI FSRTNRLDNF
301: PPHVVLELLK LANRFCCDEM KSSCDEHLAH LVGTLDEAML LIEYGLEESA YLLVAACLQV FLRELPSSMH NPNVIKIFCS VEGRGRLASL GHASFKLYFF
401: LSQIAMEDDM KSNTTVMILE RLVECAVESW EKQLACHQLG VVMLERKEYK DAQRWFNTAV EAGHLYSLVG VARSKFKRDH RYSAYKIINS LISDHVPTGW
501: MHQERSLYCS GKEKLLDLDT ATELDPTLTF PYKFRAVALV EENQFGAAIS ELNKILGFKA SPDCLEMRAW ISIGKEDYEG ALKDIRALLT LEPNFMMFNG
601: KIHADHMVEL LRPLAQQRSQ ADCWMQLFDH WSTVDDIGSL AVVHDMLAND PGNSLLRFRQ SLLLLRLNCQ KAAMRCLRLA RNHSKLKHER LVYEGWILYD
701: TGHREEALAK AEESISTQRS FEAFFLKAYA LADSTLDPKS AEYVIQLLGE ALRCPSDALR KGQALNNLGS VYVDCEKLDL AGDCYTNALN IKHTRAHQGL
801: ARVYHLKNQR KAAYDEMTKL IEKAQNNASA YEKRSEYCDR EMAQSDLSLA TQLDPLRTYP YRYRAAVLMD DHKENEAIEE LSRAISFKPD LQLLHLRAAF
901: YDSMGEGASA IKDCEAALCI DPGHTDTLEL YHKAREANTT DQK
001: MQHNLFTTMR SLKLAEGCKG TQVYALNPSA PTPPPPPGNS SSGGGGGGGS GGGTGGVGDK LLQHLSDHLR VNSVRSKSSR TYPPPTQPNA VVSPEFLLPC
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
101: GLPVTDLLEP QIDPCLKFVD LVEKMAQVYR RIENCSQFEK SGAYLEQCAI FRGISDPKLF RRSLRSSRQH AVDVHAKVVL ASWLRFERRE DELIGTTSMD
201: CCGRNLECPK ATLVSGYDPE SVYDPCVCSG ASRSEMMNED ECSTSQEVDY DMSFCIGDEE VRCVRYKIAS LSRPFKAMLY GGFREMKRAT INFTQNGISV
301: EGMRAAEIFS RTNRLDNFPP NVVLELLKLA NRFCCDELKS ACDSHLAHLV NSLDEAMLLI EYGLEEAAYL LVAACLQVFL RELPSSMHNP NVIKIFCSAE
401: GRERLASLGH ASFTLYFFLS QIAMEDDMKS NTTVMLLERL VECAVDSWEK QLAYHQLGVV MLERKEYKDA QRWFNAAVEA GHLYSLVGVA RTKFKRDHRY
501: SAYKIINSLI SDHKATGWMH QERSLYCSGK EKLLDLDTAT EFDPTLTFPY KFRAVALVEE NQFGAAIAEL NKILGFKASP DCLEMRAWIS IGMEDYEGAL
601: KDIRALLTLE PNFMMFNWKI HGDHMVELLR PLAQQWSQAD CWMQLYDRWS SVDDIGSLAV VHHMLANDPG KSLLRFRQSL LLLRLNCQKA AMRSLRLARN
701: HSKSEHERLV YEGWILYDTG HREEALAKAE ESISIQRSFE AFFLKAYALA DSTLDPDSSN YVIQLLQEAL KCPSDGLRKG QALNNLGSVY VDCEKLDLAA
801: DCYTNALTIK HTRAHQGLAR VYHLKNQRKA AYDEMTKLIE KAQNNASAYE KRSEYCDREM AQSDLCLATQ LDPLRTYPYR YRAAVLMDDH KESEAIDELS
901: RAISFKPDLQ LLHLRAAFYD SMGEGASAIK DCEAALCIDP GHADTLELYH KAREPNDQK
Arabidopsis Description
ETO1ETO1 [Source:UniProtKB/TrEMBL;Acc:A0A178VGM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.