Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 3
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02680.1 | CDX81296 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | CDY18674 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18003 | Canola | cytosol | 98.8 | 98.8 |
| Bra000868.1-P | Field mustard | cytosol | 97.36 | 97.47 |
| AT4G02680.1 | Thale cress | cytosol | 91.59 | 85.81 |
| VIT_00s0179g00100.t01 | Wine grape | cytosol | 75.72 | 71.11 |
| Solyc09g065640.2.1 | Tomato | cytosol | 73.68 | 69.19 |
| PGSC0003DMT400049804 | Potato | cytosol | 73.68 | 69.19 |
| GSMUA_Achr4P21140_001 | Banana | cytosol | 72.0 | 67.08 |
| KRH67265 | Soybean | cytosol | 71.51 | 67.0 |
| GSMUA_Achr4P28450_001 | Banana | cytosol | 70.31 | 66.1 |
| KRH32058 | Soybean | cytosol | 69.95 | 65.61 |
| KRH71376 | Soybean | cytosol | 69.83 | 65.58 |
| CDY14376 | Canola | cytosol | 4.81 | 65.57 |
| Os11t0585900-01 | Rice | cytosol | 67.07 | 65.11 |
| EES08750 | Sorghum | cytosol | 69.23 | 64.72 |
| Os07t0178100-01 | Rice | cytosol | 68.51 | 64.33 |
| EER95939 | Sorghum | cytosol | 68.03 | 63.74 |
| TraesCS2D01G562900.1 | Wheat | cytosol | 67.31 | 63.06 |
| TraesCS2B01G592500.1 | Wheat | cytosol | 67.31 | 63.06 |
| Zm00001d018939_P001 | Maize | cytosol | 67.19 | 62.95 |
| HORVU2Hr1G119180.1 | Barley | cytosol | 67.19 | 62.95 |
| KRG95578 | Soybean | cytosol | 71.03 | 62.34 |
| TraesCS2A01G591300.1 | Wheat | cytosol | 66.59 | 61.62 |
| Zm00001d052974_P002 | Maize | cytosol, extracellular, nucleus | 65.87 | 60.42 |
| Zm00001d007522_P023 | Maize | cytosol | 62.26 | 57.49 |
| CDY14472 | Canola | cytosol | 49.76 | 46.0 |
| CDX78038 | Canola | cytosol | 50.0 | 45.27 |
| CDY07743 | Canola | cytosol, plastid | 50.6 | 45.07 |
| CDX91443 | Canola | cytosol, plastid | 49.4 | 44.92 |
| CDX90635 | Canola | cytosol | 50.0 | 44.73 |
| CDY29045 | Canola | cytosol | 50.24 | 44.71 |
| CDX74897 | Canola | plastid | 48.92 | 44.68 |
| CDX73693 | Canola | cytosol | 50.12 | 44.22 |
| CDY66209 | Canola | plastid | 45.79 | 41.19 |
| CDY32974 | Canola | plastid | 45.31 | 40.89 |
Protein Annotations
| EnsemblPlants:CDY66290 | EnsemblPlantsGene:GSBRNA2T00053326001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR019734 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | ncoils:Coil | PANTHER:PTHR44203 |
| PANTHER:PTHR44203:SF2 | ProteinID:CDY66290 | ProteinID:CDY66290.1 | SEG:seg | SMART:SM00028 | SUPFAM:SSF48452 |
| UniParc:UPI0004EEB39E | UniProt:A0A078JIL5 | MapMan:11.5.1.3 | : | : | : |
Description
BnaA03g57300DBnaA03g57300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JIL5]
Coordinates
chrLK035183:+:15048..19044
Molecular Weight (calculated)
94682.9 Da
IEP (calculated)
5.586
GRAVY (calculated)
-0.273
Length
832 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTFYPSDSC SKESHLNSLN PQSWLQVERG KLSSSASSSA PLCRESFIKV PEPQILPHYK PLDYVEVLSQ IHEELESCSL EDRSSLYLLQ YQVFRGLGET
101: KLGQRSLRSA WQEATTVHEK VVFGSWLRYE KQGEEVIAEL LSSCGKYSEE FVPLDIASYL PVTSPEAASV KVKRHISRNV VDFSVANVLI GVSKNLLLEV
201: LVFANKFCCE RLKDACDREL ASLVSSMECA VELMDFALEE SSPILAASCL QVFLYELPES LTDERVVEAL TRVNRSQVST MAGKASFSLY SCLTEVSMRL
301: DPRSDRTLSF LEKVVDFAES DRQRVLGFHR LGCTRLLRKE YREAEEAFET ALNLGHVYSA TGLARIGYIQ GHKLWGYEKL TSVISSVSPP LGWMYQERSL
401: YCEGDKKLED LEKATELDPT LTYPYMYRAV KLMSEQNAEA ALEEINRILG FKLALECLEI RFCLYLGMDD YEAALRDIQA ALTLCPDYRM FDGKVAARQL
501: RTLVYEHVES WTTADCWMQL YEKWSNVDDI GSLSVIYQML EADACKGVLY FRQSLLLLRL KCPEAAMRSL QLAREHASSD HERLVYEGWI LYDTGHCEEG
601: LQKAKESIRI KRSFEAYFLQ AYALAESSLD PSSSSTVVSL LEDALKCPSD RLRKGQALNN LGSVYVDCEK LDLAADCYIN ALKVRHTRAH QGLARVHFLR
701: NDKAAAYEEM TRLIEKAQNN ASAYEKRSEY CDRELAKSDL EMVTRLDPLR VYPYRYRAAV LMDSRKEKEA IEELSRAIAF KADLHLLHLR AAFHEHNGDV
801: SSALRDCRAA LSVDPNHQEM LELHSRVNSH EP
101: KLGQRSLRSA WQEATTVHEK VVFGSWLRYE KQGEEVIAEL LSSCGKYSEE FVPLDIASYL PVTSPEAASV KVKRHISRNV VDFSVANVLI GVSKNLLLEV
201: LVFANKFCCE RLKDACDREL ASLVSSMECA VELMDFALEE SSPILAASCL QVFLYELPES LTDERVVEAL TRVNRSQVST MAGKASFSLY SCLTEVSMRL
301: DPRSDRTLSF LEKVVDFAES DRQRVLGFHR LGCTRLLRKE YREAEEAFET ALNLGHVYSA TGLARIGYIQ GHKLWGYEKL TSVISSVSPP LGWMYQERSL
401: YCEGDKKLED LEKATELDPT LTYPYMYRAV KLMSEQNAEA ALEEINRILG FKLALECLEI RFCLYLGMDD YEAALRDIQA ALTLCPDYRM FDGKVAARQL
501: RTLVYEHVES WTTADCWMQL YEKWSNVDDI GSLSVIYQML EADACKGVLY FRQSLLLLRL KCPEAAMRSL QLAREHASSD HERLVYEGWI LYDTGHCEEG
601: LQKAKESIRI KRSFEAYFLQ AYALAESSLD PSSSSTVVSL LEDALKCPSD RLRKGQALNN LGSVYVDCEK LDLAADCYIN ALKVRHTRAH QGLARVHFLR
701: NDKAAAYEEM TRLIEKAQNN ASAYEKRSEY CDRELAKSDL EMVTRLDPLR VYPYRYRAAV LMDSRKEKEA IEELSRAIAF KADLHLLHLR AAFHEHNGDV
801: SSALRDCRAA LSVDPNHQEM LELHSRVNSH EP
001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
Arabidopsis Description
EOL1EOL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.