Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G02680.1 | CDX81296 | AT5G65800.1 | 15118728 |
| AT4G02680.1 | CDY18674 | AT5G65800.1 | 15118728 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66290 | Canola | cytosol, plastid | 98.8 | 98.8 |
| AT4G02680.1 | Thale cress | cytosol | 91.23 | 85.47 |
| VIT_00s0179g00100.t01 | Wine grape | cytosol | 75.0 | 70.43 |
| Solyc09g065640.2.1 | Tomato | cytosol | 73.8 | 69.3 |
| PGSC0003DMT400049804 | Potato | cytosol | 73.8 | 69.3 |
| KRH67265 | Soybean | cytosol | 71.39 | 66.89 |
| GSMUA_Achr4P21140_001 | Banana | cytosol | 71.63 | 66.74 |
| KRH32058 | Soybean | cytosol | 69.95 | 65.61 |
| CDY14376 | Canola | cytosol | 4.81 | 65.57 |
| GSMUA_Achr4P28450_001 | Banana | cytosol | 69.71 | 65.54 |
| KRH71376 | Soybean | cytosol | 69.71 | 65.46 |
| Os11t0585900-01 | Rice | cytosol | 66.71 | 64.76 |
| EES08750 | Sorghum | cytosol | 68.75 | 64.27 |
| Os07t0178100-01 | Rice | cytosol | 68.15 | 64.0 |
| EER95939 | Sorghum | cytosol | 67.79 | 63.51 |
| TraesCS2B01G592500.1 | Wheat | cytosol | 66.95 | 62.73 |
| TraesCS2D01G562900.1 | Wheat | cytosol | 66.95 | 62.73 |
| HORVU2Hr1G119180.1 | Barley | cytosol | 66.83 | 62.61 |
| Zm00001d018939_P001 | Maize | cytosol | 66.83 | 62.61 |
| KRG95578 | Soybean | cytosol | 70.91 | 62.24 |
| TraesCS2A01G591300.1 | Wheat | cytosol | 66.23 | 61.29 |
| Zm00001d052974_P002 | Maize | cytosol, extracellular, nucleus | 65.5 | 60.09 |
| Zm00001d007522_P023 | Maize | cytosol | 61.9 | 57.16 |
| CDY14472 | Canola | cytosol | 49.52 | 45.78 |
| CDX78038 | Canola | cytosol | 49.76 | 45.05 |
| CDY07743 | Canola | cytosol, plastid | 50.36 | 44.86 |
| CDX91443 | Canola | cytosol, plastid | 49.28 | 44.81 |
| CDX74897 | Canola | plastid | 48.8 | 44.57 |
| CDX90635 | Canola | cytosol | 49.76 | 44.52 |
| CDY29045 | Canola | cytosol | 50.0 | 44.49 |
| CDX73693 | Canola | cytosol | 49.88 | 44.01 |
| CDY66209 | Canola | plastid | 45.31 | 40.76 |
| CDY32974 | Canola | plastid | 44.95 | 40.56 |
Protein Annotations
| EnsemblPlants:CDY18003 | EnsemblPlantsGene:GSBRNA2T00002386001 | Gene3D:1.25.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR011990 | InterPro:IPR019734 | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | ncoils:Coil | PANTHER:PTHR44203 |
| PANTHER:PTHR44203:SF2 | ProteinID:CDY18003 | ProteinID:CDY18003.1 | SEG:seg | SMART:SM00028 | SUPFAM:SSF48452 |
| UniParc:UPI0004EE48E3 | UniProt:A0A078G051 | MapMan:11.5.1.3 | : | : | : |
Description
BnaC03g30750DBnaC03g30750D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G051]
Coordinates
chrLK032080:+:471176..475165
Molecular Weight (calculated)
94608.8 Da
IEP (calculated)
5.438
GRAVY (calculated)
-0.279
Length
832 amino acids
Sequence
(BLAST)
(BLAST)
001: MRTFYPSDSC SKESHLNSLN PQSWLQVERG KLPSSASSSA PLCRESFIKV PEPQILPHYK PLDYVEVLAQ IHEELESCSL EDRSSLYLLQ YQVFRGLGET
101: KLGQRSLRSA WQESTTVHEK VVFGSWLRYE KQGEEVIAEL LSSCGKYSEE FVPLDIASYL PVTSPEAASV KVKRHISRNV VDFSVANVLI GVSKNLLIEV
201: LVFANKFCCE SLKDACDREL ASLVSSMECA VELMDFALEE SSPTLAASCL QVFLYELPES LTDERVVEAL TRVNRSQVST MAGKASFSLY SCLTEVSMRL
301: DPRSDRTLAF LEKVVDFAEN DRQRVLGFHR LGCTRLLRKE DREAEEAFET AFNLGHVYSA TGLARIGYIQ GHKLWGYEKL TSVISSVSPP LGWMYQERSL
401: YCEGDKKLED LEKATELDPT LTYPYMYRAV KLMSEQNAEA ALEEINRILG FKLALECLEI RFCLYLGMDD YEAALRDIQA ALTLCPDYRM FDGKVAARQL
501: RTLVYEHVES WTTADCWMQL YEKWSNVDDI GSLSVIYQML EADACKGVLY FRQSLLLLRL KCPEAAMRSL QLAREHASSD HERLVYEGWI LYDTGHCEEG
601: LQKAKESIRI KRSFEAYFLQ AYALAESSLD PSSSSTVVSL LEDALKCPSD RLRKGQALNN LGSVYVDCEK LDLAADCYIN ALKVRHTRAH QGLARVHFLR
701: NDKAAAYEEM TRLIEKAQNN ASAYEKRSEY CDRELAKSDL EMVTRLDPLR VYPYRYRAAV LMDSRKEKEA IEELSRAIAF KADLHLLHLR AAFHEHNGDV
801: SSALRDCRAA LSVDPNHQEM LELHSRVNSH EP
101: KLGQRSLRSA WQESTTVHEK VVFGSWLRYE KQGEEVIAEL LSSCGKYSEE FVPLDIASYL PVTSPEAASV KVKRHISRNV VDFSVANVLI GVSKNLLIEV
201: LVFANKFCCE SLKDACDREL ASLVSSMECA VELMDFALEE SSPTLAASCL QVFLYELPES LTDERVVEAL TRVNRSQVST MAGKASFSLY SCLTEVSMRL
301: DPRSDRTLAF LEKVVDFAEN DRQRVLGFHR LGCTRLLRKE DREAEEAFET AFNLGHVYSA TGLARIGYIQ GHKLWGYEKL TSVISSVSPP LGWMYQERSL
401: YCEGDKKLED LEKATELDPT LTYPYMYRAV KLMSEQNAEA ALEEINRILG FKLALECLEI RFCLYLGMDD YEAALRDIQA ALTLCPDYRM FDGKVAARQL
501: RTLVYEHVES WTTADCWMQL YEKWSNVDDI GSLSVIYQML EADACKGVLY FRQSLLLLRL KCPEAAMRSL QLAREHASSD HERLVYEGWI LYDTGHCEEG
601: LQKAKESIRI KRSFEAYFLQ AYALAESSLD PSSSSTVVSL LEDALKCPSD RLRKGQALNN LGSVYVDCEK LDLAADCYIN ALKVRHTRAH QGLARVHFLR
701: NDKAAAYEEM TRLIEKAQNN ASAYEKRSEY CDRELAKSDL EMVTRLDPLR VYPYRYRAAV LMDSRKEKEA IEELSRAIAF KADLHLLHLR AAFHEHNGDV
801: SSALRDCRAA LSVDPNHQEM LELHSRVNSH EP
001: MRTFYPSDSC KESQLDSLNP QSWLQVERGK LSSSASSSAP LCRESFIKVP EPQILPHYKP LDYVEVLAQI HEELDTCPLQ ERSILYLLQY QVFRGLGETK
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
101: LRRRSLQSAW QEATTVHEKV VFGSWLRYEK QGEEVITDLL SSCGKYSEEF VPLDIASYFP ATTASSPEAA SVKTNRSVSK NVVFKIGEEK IACQRRKIAS
201: LSAPFHAMLY GNFTESLLDE IDMSENHVSS SAMRVVRDFS VVGVLIGVSK NLLLEVLVFA NKFCCERLKD ACDRELASLI SSMECAIELM DFALEENSPI
301: LASSCLQVFL YEMPDSLNDE RVVEVLTRVN RSQVSTMAGK APFSLYSCLS EVSMCIDPRS DRTLGFLEKL VDFAENDRQQ VLGFHRLGCM RLLRKEYREA
401: EEAFETAFNL GHVYSATGLA RLGYIQGHRL WAYEKLSSVI SSVSPPLGWM YQERSFYCEG DKKLEDLEKA TELDPTLTYP YMYRAVTRMS KQNAKAALEE
501: INRILGFKLA LECLEIRFCL YLGMDDYEAA LRDIQAALTL CPDYRMFDGK VAGRQLQTLV YEHVENWTTA DCWMQLYEKW SNVDDIGSLS VIYQMLESDA
601: CKGVLYFRQS LLLLRLNCPE AAMRSLQLAR EHASSDHERL VYEGWILYDT GHCEEGLQKA KESIGIKRSF EAYFLQAYAL AESSLDPSSS STVVSLLEDA
701: LKCPSDRLRK GQALNNLGSV YVDCEKLDLA ADCYINALKV RHTRAHQGLA RVHFLRNDKA AAYEEMTRLI EKAQNNASAY EKRSEYCDRE LAKSDLEMVT
801: RLDPLRVYPY RYRAAVLMDS RKEREAITEL SRAIAFKADL HLLHLRAAFH EHIGDVTSAL RDCRAALSVD PNHQEMLELH SRVNSHEP
Arabidopsis Description
EOL1EOL1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.